Gene interactions and pathways from curated databases and text-mining
PHGDH: top 25 interacting genes (chr1:120254418-120286849)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only PHGDH-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
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Less-frequently mentioned interactions with PHGDH, not among the Top 25
Other genes interacting with PHGDH. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

RPL28 ▸ VASN ▸ HDAC5 ▸ MAPK6 ▸ ALG1 ▸ HSPA8 ▸ TUBA4A ▸
ATP2A2 ▸ SHC1 ▸ NARS ▸ PAWR ▸ RPL15 ▸ XPOT ▸ RPL18 ▸
SNRPD2 ▸ TIMM50 ▸ MDN1 ▸ GSTO1 ▸ ITPR3 ▸ APP ▸ RPL26 ▸
ATP6V1B2 ▸ DDB2 ▸ PHB2 ▸ ARF3 ▸ TUFM ▸ FLNA ▸ TMEM33 ▸
ATP5J ▸ RPS20 ▸ SOS1 ▸ DCAF10 ▸ SSR1 ▸ CHCHD3 ▸ SLC37A4 ▸
ITGB1 ▸ CPNE1 ▸ VPRBP ▸ COPB1 ▸ PFN1 ▸ RPS25 ▸ RPL19 ▸
SF3A3 ▸ DST ▸ PLEC ▸ COPS3 ▸ PGAM5 ▸ HMGB1 ▸ SLC25A3 ▸
ESYT2 ▸ RPL5 ▸ IPO7 ▸ STXBP3 ▸ TBC1D15 ▸ KPNA2 ▸ MRPL13 ▸
PRMT1 ▸ CORO1C ▸ DLST ▸ IARS ▸ UTP14A ▸ HSP90AB1 ▸ NAT10 ▸
SDF4 ▸ EIF4A3 ▸ ARL8A ▸ MLLT11 ▸ MAPRE1 ▸ PAGE1 ▸ NONO ▸
GFM1 ▸ ATAD3A ▸ EIF2S3 ▸ VAV2 ▸ VPS35 ▸ DCAF16 ▸ EFTUD2 ▸
SRSF1 ▸ DHX9 ▸ CCNB1 ▸ FLNB ▸ RPL29 ▸ SSRP1 ▸ EPB41 ▸
WDR36 ▸ CAPRIN1 ▸ FDFT1 ▸ TRA2A ▸ EIF4A1 ▸ POLR2C ▸ HIST2H2AA4 ▸
GTF3C3 ▸ PPP2CA ▸ NDUFA2 ▸ ARF6 ▸ TM9SF2 ▸ IGF2R ▸ VDAC3 ▸
MYO18A ▸ PCYOX1 ▸ DNAJB1 ▸ SYNCRIP ▸ RPS28 ▸ S100A6 ▸ EPHX1 ▸
PGRMC1 ▸ BCLAF1 ▸ HMGA1 ▸ RPS8 ▸ PFDN5 ▸ FEN1 ▸ CDK2 ▸
DCAF11 ▸ EIF4H ▸ LIMA1 ▸ UGDH ▸ UBE2L3 ▸ TECR ▸ CHD4 ▸
MAPK13 ▸ STAT3 ▸ IK ▸ PRPF4 ▸ NDUFAF4 ▸ ERLIN2 ▸ SLC26A11 ▸
NAPG ▸ RPL10 ▸ QKI ▸ SERBP1 ▸ PPP2R1B ▸ FBLN1 ▸ RPS11 ▸
STIP1 ▸ UBE2C ▸ CRKL ▸ RPA2 ▸ VAPA ▸ MAP4 ▸ PSMC5 ▸
TTC9C ▸ COMT ▸ RUVBL2 ▸ ANXA1 ▸ EIF3B ▸ MDH2 ▸ YWHAH ▸
RPS24 ▸ MYO1C ▸ H1FX ▸ CALM1 ▸ MRPL43 ▸ ATP5D ▸ RAB35 ▸
RPL13A ▸ RPS6 ▸ TUBB3 ▸ ELAVL1 ▸ LGALS1 ▸ DHX30 ▸ FASN ▸
DDA1 ▸ RCC2 ▸ SRSF5 ▸ TRPC4AP ▸ FARSB ▸ SNRNP70 ▸ FERMT3 ▸
GSTP1 ▸ DCAF6 ▸ PRDX1 ▸ RAD23A ▸ VDAC1 ▸ CYB5B ▸ STOM ▸
TMX1 ▸ SLC1A5 ▸ DBN1 ▸ RPL8 ▸ EPPK1 ▸ SART3 ▸ MAP7D1 ▸
GNB1L ▸ RPL7 ▸ SUMO4 ▸ RPS3A ▸ PGAM1 ▸ ARHGEF1 ▸ TMEM109 ▸
DAB2 ▸ SNRPB ▸ MYL12B ▸ PPT1 ▸ CPSF6 ▸ MAP1A ▸ MRPS23 ▸
RNH1 ▸ LRRFIP2 ▸ TPM1 ▸ PRPF19 ▸ SRSF11 ▸ TMOD3 ▸ EEF1A1 ▸
LMAN1 ▸ TUBB2A ▸ CAND1 ▸ ATP5H ▸ DCAF15 ▸ DCAF8 ▸ RAI14 ▸
SAR1A ▸ ANKHD1 ▸ PSMD11 ▸ SEC23B ▸ SFXN1 ▸ SCO2 ▸ VAMP3 ▸
TPM2 ▸ CCT8 ▸ DNAJA1 ▸ H2AFV ▸ PPP2R1A ▸ UBA1 ▸ NPM1 ▸
ATP5A1 ▸ ARPC2 ▸ MYO1B ▸ NDUFS7 ▸ SYNPO ▸ SPECC1 ▸ HSPA1A ▸
NME2 ▸ NUP210 ▸ PABPC1 ▸ HNRNPD ▸ DNAJC11 ▸ MCM6 ▸ RPS7 ▸
PPID ▸ SEC61B ▸ PELP1 ▸ DDX3X ▸ NAA38 ▸ KRT7 ▸ SLC25A11 ▸
SCRIB ▸ RPL13 ▸ TUBB4B ▸ SRP9 ▸ RTCB ▸ HSP90AA1 ▸ SDHA ▸
GID8 ▸ SLC3A2 ▸ MATR3 ▸ SAFB2 ▸ ZW10 ▸ FLII ▸ SMARCA5 ▸
SNRPE ▸ CNN2 ▸ PRKCB ▸ RPS4X ▸ CELF2 ▸ HNRNPH1 ▸ XPO5 ▸
ATP5C1 ▸ BCAP31 ▸ COX6C ▸ FAM162A ▸ SLC25A12 ▸ SYNJ2BP ▸ VTN ▸
EGFR ▸ TUBA1B ▸ KRTCAP2 ▸ CPT2 ▸ SKP2 ▸ ATP5F1 ▸ PRKD1 ▸
PFKL ▸ SPTLC1 ▸ PSMA7 ▸ EDC4 ▸ PSMG1 ▸ DLD ▸ NAPA ▸
C1QBP ▸ EIF2S1 ▸ TMEM205 ▸ STAT1 ▸ MT-CO2 ▸ FAM186B ▸ ENO1 ▸
GLRX3 ▸ CHCHD4 ▸ DCAF12 ▸ DNAJA2 ▸ PSAT1 ▸ SRR ▸ HBZ ▸
GRB2 ▸ TMED10 ▸ APOBEC3C ▸ ERLIN1 ▸ GALE ▸ PCMT1 ▸ TRIM28 ▸
PUF60 ▸ BZW1 ▸ TUBB ▸ NME2P1 ▸ CAPZA1 ▸ MTA2 ▸ RPLP2 ▸
SEPT9 ▸ HIST1H1E ▸ HNRNPH2 ▸ PSMD13 ▸ S100A7 ▸ CEPT1 ▸ RPL17 ▸
SUMO1 ▸ VPS26A ▸ UQCRC2 ▸ SLC25A10 ▸ SCIN ▸ CCNO ▸ PICALM ▸
EIF3K ▸ LYPLA1 ▸ NDUFA8 ▸ SAR1B ▸ RPL35 ▸ GAPDH ▸ RFT1 ▸
SON ▸ EIF3C ▸ PPP3CA ▸ SF1 ▸ SLC25A13 ▸ SMCHD1 ▸ COPS5 ▸
RPLP1 ▸ EEF2 ▸ HSPA9 ▸ RAE1 ▸ DDX5 ▸ SFPQ ▸ SMAP2 ▸
ESR1 ▸ SIPA1 ▸ FKBP8 ▸ CUL5 ▸ COPS7B ▸ MYL9 ▸ DDB1 ▸
SUPT5H ▸ UBD ▸ CCM2L ▸ PRKDC ▸ RPL4 ▸ VDAC2 ▸ DUT ▸
HIST1H3J ▸ TMED2 ▸ ASPH ▸ IMPDH2 ▸ AUP1 ▸ MLF2 ▸ CLN3 ▸
DNAJA4 ▸ AKR1C1 ▸ BMP2K ▸ SF3B6 ▸ RAB1B ▸ XPO1 ▸ PSMB1 ▸
COPS6 ▸ HSPB1 ▸ RCN2 ▸ NDUFV2 ▸ CUL4B ▸ PTPLAD1 ▸ CCT5 ▸
PSMB5 ▸ PPP1R12A ▸ SSBP1 ▸ COX4I1 ▸ EPS15L1 ▸ HIST2H2AA3 ▸ KPNB1 ▸
HDAC1 ▸ KRT17 ▸ PNKD ▸ POLR2H ▸ RPL31 ▸ STRAP ▸ AP2A1 ▸
CSNK2B ▸ SARS ▸ UBE2M ▸ LRRC59 ▸ UQCRC1 ▸ MCM3 ▸ LMO7 ▸
TFRC ▸ VAV3 ▸ HTRA1 ▸ TRAP1 ▸ RPS15 ▸ RPSA ▸ TTLL12 ▸
BAG6 ▸ CPSF7 ▸ ILK ▸ MRPS28 ▸ HMGB2 ▸ LMAN2 ▸ CSNK2A1 ▸
KANK2 ▸ TXN ▸ HIST1H4A ▸ APOA1BP ▸ RANBP1 ▸ SERPINH1 ▸ LRPPRC ▸
HNRNPA1 ▸ RPIA ▸ GIGYF1 ▸ RPL24 ▸ TTC1 ▸ C11orf83 ▸ TKT ▸
XRCC6 ▸ AP2S1 ▸ VAT1 ▸ NECAP2 ▸ COPS7A ▸ QARS ▸ RAB7A ▸
RRAS2 ▸ ARPC1A ▸ MYL6 ▸ PSMB6 ▸ MARCKS ▸ ATP5B ▸ KRT10 ▸
MYBBP1A ▸ RAC1 ▸ DHCR7 ▸ GRWD1 ▸ TARS2 ▸ UBB ▸ TARS ▸
NEXN ▸ MGST3 ▸ PDIA6 ▸ FANCI ▸ GP1BB ▸ PTBP1 ▸ THNSL2 ▸
DIMT1 ▸ TIMM23 ▸ EPN1 ▸ PPP6C ▸ SUB1 ▸ RCC1 ▸ CBR1 ▸
RPL30 ▸ PPP1R9B ▸ TMPO ▸ C14orf166 ▸ KRT9 ▸ HSPA1L ▸ RIC8A ▸
PI4KA ▸ FANCD2 ▸ DPM1 ▸ ALDH1B1 ▸ EEF1D ▸ PPP1CA ▸ TRAF3IP1 ▸
APOE ▸ CCT7 ▸ USP7 ▸ CLTC ▸ NXPE2 ▸ YES1 ▸ NCL ▸
SURF4 ▸ ANXA2 ▸ DHX16 ▸ PRPS2 ▸ SRP14 ▸ CYC1 ▸ GTF3C1 ▸
HIST1H2BJ ▸ NDUFA13 ▸ HM13 ▸ YARS ▸ UBE2N ▸ VCAM1 ▸ CRBN ▸
SRSF10 ▸ LAMP1 ▸ MCM2 ▸ RPS14 ▸ STK4 ▸ MYH10 ▸ NUP205 ▸
MYL4 ▸ SCAMP3 ▸ CHP1 ▸ RANBP9 ▸ ST13 ▸ SV2A ▸ YWHAG ▸
MAD2L1 ▸ NOP58 ▸ COPS4 ▸ DDX18 ▸ DNMT1 ▸ PDAP1 ▸ PRMT5 ▸
TNPO3 ▸ CLNS1A ▸ PHF5A ▸ NDUFA4 ▸ NDUFS3 ▸ RUVBL1 ▸ MAPRE2 ▸
CKS2 ▸ SND1 ▸ RPN1 ▸ MYO1A ▸ CLIC5 ▸ CTSH ▸ RAB14 ▸
IDI1 ▸ FLOT2 ▸ CHMP2B ▸ PCBP1 ▸ GNB3 ▸ CCDC47 ▸ PSMC6 ▸
TPM3 ▸ NCBP1 ▸ HSP90B1 ▸ GTF3C5 ▸ DIAPH1 ▸ HNRNPK ▸ ERCC8 ▸
TGM2 ▸ RPS15A ▸ CLTA ▸ PSMA4 ▸ CYB5R3 ▸ RBM12 ▸ HSD17B12 ▸
CKAP5 ▸ CLPB ▸ DYNLL1 ▸ LUZP1 ▸ PDLIM7 ▸ ANAPC7 ▸ CD59 ▸
RPL35A ▸ MISP ▸ YWHAZ ▸ HADHA ▸ RPL3 ▸ PDCD6 ▸ RPL23 ▸
ECT2 ▸ HIST1H3A ▸ ANXA6 ▸ SF3B1 ▸ USP15 ▸ RSU1 ▸ SVIL ▸
CCT6A ▸ KRT18 ▸ PPP2R5C ▸ RPS3 ▸ PPP1CC ▸ PTRH2 ▸ ESPL1 ▸
PHB ▸ TUBB2B ▸ ARL2 ▸ CDIPT ▸ ILF3 ▸ HSPBP1 ▸ TIAF1 ▸
PPP1CB ▸ PARP1 ▸ WDTC1 ▸ C2orf47 ▸ NDUFA9 ▸ HIST1H1C ▸ EEF2K ▸
GART ▸ OGDH ▸ EIF3F ▸ PBLD ▸ RAP2B ▸ HIST1H3C ▸ VCL ▸
ITSN2 ▸ PSMA5 ▸ YTHDF2 ▸ BSG ▸ COX17 ▸ MYH14 ▸ CCNB2 ▸
XRCC5 ▸ SPECC1L ▸ PSMD9 ▸ ITGA4 ▸ EPS15 ▸ RPS27A ▸ PPA1 ▸
MYL12A ▸ YWHAQ ▸ PPIH ▸ IQGAP1 ▸ GAR1 ▸ SC5D ▸ SKP1 ▸
TAGLN2 ▸ RAP1B ▸ PSMA2 ▸ RPL21 ▸ CLPP ▸ TAF15 ▸ LSM12 ▸
ATP5O ▸ ARPC3 ▸ G3BP1 ▸ GLUD1 ▸ ARPC4 ▸ VBP1 ▸ PKMYT1 ▸
RPS27 ▸ PPIA ▸ SRPRB ▸ NHP2 ▸ MRPS34 ▸ PSMG2 ▸ TBCD ▸
DHRS7B ▸ MARS ▸ RACGAP1 ▸ USP39 ▸ IPO5 ▸ FN1 ▸ EPRS ▸
VASP ▸ PRDX6 ▸ AP2A2 ▸ PDHB ▸ BZW2 ▸ TCEB1 ▸ HSPG2 ▸
SRSF2 ▸ MYO6 ▸ CCDC124 ▸ YWHAE ▸ SRI ▸ SLC25A6 ▸ RPS9 ▸
KIDINS220 ▸ ATP1B3 ▸ MPP1 ▸ CLPX ▸ POLR1C ▸ STX4 ▸ CBX3 ▸
S100A8 ▸ CTSD ▸ TNFRSF1B ▸ EMG1 ▸ TIMM10 ▸ UBR4 ▸ UBE2NL ▸
CUL2 ▸ LRBA ▸ POLDIP2 ▸ ITGAV ▸ GSTM1 ▸ NCSTN ▸ UACA ▸
CORO1B ▸ SNRPF ▸ HADHB ▸ AMBRA1 ▸ PDCD10 ▸ PMVK ▸ TOMM22 ▸
PSMD2 ▸ FAU ▸ RPS13 ▸ OLA1 ▸ SRSF3 ▸ COPE ▸ EIF5B ▸
DAD1 ▸ SYNGR1 ▸ TUBB4A ▸ ZMPSTE24 ▸ TK1 ▸ HNRNPU ▸ SMC4 ▸
HSPE1 ▸ SACM1L ▸ ANP32B ▸ PSMB2 ▸ DDX47 ▸ TPR ▸ HIST1H3I ▸
CFL1 ▸ EMD ▸ KRT31 ▸ PCNA ▸ SCAP ▸ SMU1 ▸ TIA1 ▸
TTN ▸ SET ▸ PDCD5 ▸ IRS4 ▸ RCN1 ▸ RPS16 ▸ CUL3 ▸
AIMP2 ▸ BROX ▸ KARS ▸ PDIA3 ▸ CSE1L ▸ RPS23 ▸ MPRIP ▸
AHNAK ▸ HIP1 ▸ NOMO3 ▸ VPS28 ▸ PGK1 ▸ PSMB3 ▸ BAG2 ▸
PSMA6 ▸ UTP18 ▸ ALYREF ▸ ATP5J2 ▸ ATP5L ▸ CLN5 ▸ PIAS4 ▸
HEATR1 ▸ RPS5 ▸ AP2M1 ▸ TAOK2 ▸ GALK1 ▸ TOMM70A ▸ CACYBP ▸
RPL14 ▸ STUB1 ▸ ESYT1 ▸ NAA15 ▸ NUP188 ▸ ESD ▸ LYPLAL1 ▸
TCERG1 ▸ COPA ▸ GSTM3 ▸ COASY ▸ USMG5 ▸ TFAM ▸ SRSF9 ▸
MSN ▸ NDUFA5 ▸ SLC25A4 ▸ CBLB ▸ COX5A ▸ APIP ▸ NUDC ▸
PCBP2 ▸ RPN2 ▸ FUS ▸ HNRNPF ▸ CNOT1 ▸ SEC24C ▸ DYNC1H1 ▸
PFDN1 ▸ C3 ▸ IPO4 ▸ IRAK1 ▸ DHX15 ▸ MACROD1 ▸ PPP2CB ▸
RPL6 ▸ SPTBN1 ▸ TCEB2 ▸ LMNA ▸ EEF1G ▸ GDI2 ▸ LASP1 ▸
CFL2 ▸ ALDOA ▸ RPS10 ▸ SLIRP ▸ MRTO4 ▸ G6PD ▸ HIST1H3D ▸
RPL18A ▸ CAMK2D ▸ DDX6 ▸ PES1 ▸ RAB11B ▸ SSR3 ▸ TOP2A ▸
VAMP8 ▸ NUP155 ▸ APRT ▸ ITGA5 ▸ MRPS6 ▸ GNAI3 ▸ MYO3B ▸
DNAJC7 ▸ GCN1L1 ▸ PTPN11 ▸ RPS26 ▸ CKS1B ▸ SNRPA ▸ HSPA6 ▸
PRPF8 ▸ CDKN1B ▸ RAB21 ▸ SHMT2 ▸ TRIM55 ▸ KRT2 ▸ TUBB6 ▸
RBBP4 ▸ FLNC ▸ DAPK3 ▸ SPTAN1 ▸ CCT3 ▸ ISG15 ▸ GMPS ▸
ASNS ▸ CTTN ▸ PTGES3 ▸ SEC61A1 ▸ AURKB ▸ STAT2 ▸ GMFB ▸
KRT8 ▸ PSMD12 ▸ RAB11A ▸ LCP1 ▸ HIST1H3E ▸ HIST1H3F ▸ MYH9 ▸
PKM ▸ CCT4 ▸ DDX1 ▸ ATXN10 ▸ HNRNPA2B1 ▸ BLVRB ▸ DTL ▸
LYPLA2 ▸ NASP ▸ RPL36 ▸ EIF5 ▸ LETM1 ▸ RPL23A ▸ IMMT ▸
SEPT2 ▸ HIST1H1B ▸ SLC16A1 ▸ PSMD6 ▸ U2AF2 ▸ CCNA2 ▸ CKB ▸
MDC1 ▸ UBC ▸ HSPD1 ▸ PRDX3 ▸ RPL10A ▸ MAPK1 ▸ BAX ▸
PAFAH1B2 ▸ ATP1A1 ▸ M6PR ▸ NDUFAF3 ▸ SSB ▸ ARCN1 ▸ EEF1E1 ▸
LMNB1 ▸ YBX1 ▸ GSTK1 ▸ SLC25A1 ▸ CCDC85C ▸ PDLIM5 ▸ GANAB ▸
RPL12 ▸ HIST1H3B ▸ RPL27A ▸ UFL1 ▸ GSN ▸ PLS3 ▸ AK2 ▸
ALDH18A1 ▸ CYCS ▸ PFDN2 ▸ PPP6R3 ▸ OSBPL8 ▸ HNRNPDL ▸ STON2 ▸
SF3B3 ▸ SMARCA4 ▸ U2AF1 ▸ ICAM1 ▸ ATXN2L ▸ MAP3K3 ▸ MEPCE ▸
LDHB ▸ KRT5 ▸ CUL4A ▸ IGF2BP3 ▸ STOML2 ▸ MLLT4 ▸ SKIV2L2 ▸
ZYX ▸ CANX ▸ CAP1 ▸ SLC25A5 ▸ FBXO25 ▸ AIFM1 ▸ AP2B1 ▸
N6AMT1 ▸ RHOB ▸ CCT2 ▸ KIAA0368 ▸ MIF ▸ NIPSNAP1 ▸ GTPBP4 ▸
RPS18 ▸ RAB6A ▸ SNRPA1 ▸ HIST1H3H ▸ HIST1H2AA ▸ H2BFS ▸ EEF1B2 ▸
ARPC5 ▸ SNAP23 ▸ CHCHD6 ▸ GPS1 ▸ THRAP3 ▸ MACF1 ▸ RAN ▸
NHP2L1 ▸ RAB10 ▸ PAICS ▸ SNRPD3 ▸ SAP18 ▸ VIM ▸ RALY ▸
LUC7L2 ▸ CCAR1 ▸ PFKP ▸ SLC25A18 ▸ CLIC2 ▸ DHRS7 ▸ HSPA5 ▸
RPA1 ▸ TNPO2 ▸ MMS19 ▸ HIST1H3G ▸ DCAF4 ▸ MCM4 ▸ KRT1 ▸
PSMA3 ▸ WDR1 ▸ HNRNPM ▸ LDHA ▸ RAB5C ▸ PSMD3 ▸ GDA ▸
YWHAB ▸ PA2G4 ▸ NOP56 ▸ FLOT1 ▸ SSR4 ▸ RPL32 ▸ PFDN6 ▸
RBBP7 ▸ CAPZB ▸ GOLGA7 ▸ TYMS ▸ NACA ▸ RPL27 ▸ NAP1L1 ▸
NAP1L4 ▸ TLN1 ▸ ILF2 ▸ DDX39B ▸ TFG ▸ TENC1 ▸ CLTB ▸
IGF2BP2 ▸ HIST1H2BH ▸ CBWD6 ▸ RPL22 ▸ FSCN1 ▸ SEC22B ▸ PGRMC2 ▸
Data information
Please see the Gene Interactions Track Manual.