Gene interactions and pathways from curated databases and text-mining
PHGDH: top 25 interacting genes (chr1:120254418-120286849)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only PHGDH-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
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Less-frequently mentioned interactions with PHGDH, not among the Top 25
Other genes interacting with PHGDH. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

SNRPA ▸ EIF5B ▸ LUZP1 ▸ HM13 ▸ GMPS ▸ RPL30 ▸ STXBP3 ▸
PPP2CB ▸ THNSL2 ▸ TMED10 ▸ TUBB ▸ FLNA ▸ ATP5L ▸ CHMP2B ▸
GART ▸ RPL4 ▸ ITGA5 ▸ STOM ▸ CYB5B ▸ HSPB1 ▸ COPS7A ▸
SRR ▸ EGFR ▸ ANAPC7 ▸ LMNA ▸ DHX15 ▸ PI4KA ▸ RPL27A ▸
EEF2K ▸ LMAN1 ▸ LMNB1 ▸ PRDX1 ▸ PRDX6 ▸ SUMO4 ▸ MATR3 ▸
HIST1H4A ▸ ARPC2 ▸ UBA1 ▸ TUBA1B ▸ PIAS4 ▸ DDB1 ▸ STIP1 ▸
USP7 ▸ EIF2S1 ▸ EPHX1 ▸ HADHB ▸ S100A7 ▸ SEC24C ▸ ISG15 ▸
PAICS ▸ DHCR7 ▸ MAPK6 ▸ PPP1CC ▸ RPL6 ▸ FDFT1 ▸ NDUFA9 ▸
RHOB ▸ NACA ▸ LAMP1 ▸ MISP ▸ ARHGEF1 ▸ MYL9 ▸ RPL10 ▸
UTP18 ▸ HIST2H2AA3 ▸ HIST1H3I ▸ HSPA8 ▸ AMBRA1 ▸ AK2 ▸ DDX6 ▸
ELAVL1 ▸ MRPS28 ▸ RNH1 ▸ RANBP9 ▸ YWHAE ▸ PDAP1 ▸ BCLAF1 ▸
BZW1 ▸ DDX1 ▸ RPL23 ▸ NDUFAF4 ▸ PGRMC1 ▸ YWHAZ ▸ SVIL ▸
HNRNPA1 ▸ ARL8A ▸ PMVK ▸ ATP5H ▸ RPN2 ▸ BZW2 ▸ FERMT3 ▸
MYL4 ▸ CCDC124 ▸ SET ▸ RAB11B ▸ MCM6 ▸ TCEB1 ▸ UBE2C ▸
DCAF15 ▸ SRP9 ▸ SNRPD3 ▸ VAMP8 ▸ SLC3A2 ▸ PES1 ▸ RTCB ▸
KANK2 ▸ SNRPD2 ▸ SSR4 ▸ ESYT2 ▸ SERBP1 ▸ CCDC47 ▸ HIST1H3A ▸
ARPC1A ▸ PSMD9 ▸ NARS ▸ RAD23A ▸ IGF2R ▸ APP ▸ DCAF16 ▸
BCAP31 ▸ PHF5A ▸ IQGAP1 ▸ ARPC5 ▸ CKAP5 ▸ CLN5 ▸ DDX5 ▸
CYB5R3 ▸ HNRNPD ▸ APOE ▸ ATXN10 ▸ PDCD5 ▸ GOLGA7 ▸ EPRS ▸
TMEM205 ▸ RPS27 ▸ RPL21 ▸ RPL23A ▸ SPTBN1 ▸ SRP14 ▸ DDX47 ▸
TAF15 ▸ YWHAQ ▸ GALK1 ▸ TCEB2 ▸ DCAF11 ▸ PLEC ▸ WDR1 ▸
CBLB ▸ CLIC5 ▸ PGAM1 ▸ TLN1 ▸ VCAM1 ▸ FAM162A ▸ STAT3 ▸
BAG2 ▸ EIF4A3 ▸ PSMA6 ▸ VASN ▸ CLPX ▸ PCBP1 ▸ SLC37A4 ▸
SNRPF ▸ MYH9 ▸ TAGLN2 ▸ GAPDH ▸ PDIA6 ▸ MYO1B ▸ NOP56 ▸
NAT10 ▸ DCAF6 ▸ MYL6 ▸ NDUFAF3 ▸ PGAM5 ▸ RPS18 ▸ S100A6 ▸
STOML2 ▸ PPP1CA ▸ SKIV2L2 ▸ PSMD12 ▸ SLC25A11 ▸ CPT2 ▸ RPS3 ▸
CORO1B ▸ MYO1C ▸ FAM186B ▸ HIST1H1E ▸ YTHDF2 ▸ ATP1A1 ▸ MLLT11 ▸
NDUFA5 ▸ ERLIN1 ▸ DCAF4 ▸ HEATR1 ▸ PCBP2 ▸ PUF60 ▸ CAMK2D ▸
PLS3 ▸ NAA15 ▸ CUL3 ▸ RPL22 ▸ SFPQ ▸ SRPRB ▸ FASN ▸
ERCC8 ▸ RPS20 ▸ RBM12 ▸ PTGES3 ▸ SLC25A4 ▸ HSP90AB1 ▸ ITGB1 ▸
RPS6 ▸ NAA38 ▸ PRMT5 ▸ TUBB6 ▸ KIDINS220 ▸ S100A8 ▸ COPS5 ▸
RPL29 ▸ DNAJA4 ▸ AP2B1 ▸ CCDC85C ▸ SON ▸ LRRC59 ▸ MAPK1 ▸
SLC26A11 ▸ HBZ ▸ RUVBL2 ▸ G6PD ▸ TAOK2 ▸ ITGA4 ▸ EIF3B ▸
RPS16 ▸ AP2S1 ▸ IMMT ▸ TBCD ▸ ATP5A1 ▸ SOS1 ▸ CHCHD6 ▸
RPL7 ▸ SLC16A1 ▸ ARCN1 ▸ H1FX ▸ RAE1 ▸ TRPC4AP ▸ SLIRP ▸
ICAM1 ▸ SMC4 ▸ ATP5C1 ▸ HIST1H2BH ▸ DDX39B ▸ CUL4A ▸ CTSH ▸
FKBP8 ▸ HSPA1A ▸ MPRIP ▸ RPS7 ▸ U2AF1 ▸ LSM12 ▸ SHC1 ▸
DIAPH1 ▸ CNOT1 ▸ ANP32B ▸ PTRH2 ▸ CELF2 ▸ TUBB4A ▸ GSTM3 ▸
RPS9 ▸ KRT18 ▸ NPM1 ▸ PDIA3 ▸ MYO1A ▸ PICALM ▸ SCO2 ▸
RPS24 ▸ SRSF10 ▸ COPS3 ▸ TNPO3 ▸ XPO5 ▸ AP2A2 ▸ LDHB ▸
HSPA5 ▸ FLOT2 ▸ NDUFA8 ▸ HNRNPF ▸ MDC1 ▸ RPL18 ▸ OGDH ▸
LDHA ▸ AIFM1 ▸ RACGAP1 ▸ SYNCRIP ▸ MYH14 ▸ RAB35 ▸ PA2G4 ▸
FBLN1 ▸ TPM3 ▸ SIPA1 ▸ RPS15A ▸ CFL1 ▸ STON2 ▸ NCBP1 ▸
RAB7A ▸ TPM2 ▸ IK ▸ TOMM22 ▸ RPIA ▸ NXPE2 ▸ PPP1R9B ▸
RAB1B ▸ EIF5 ▸ VPS28 ▸ ATP5O ▸ MRPL13 ▸ RBBP4 ▸ APOBEC3C ▸
PPP2R1B ▸ RAB5C ▸ SSRP1 ▸ NHP2 ▸ C11orf83 ▸ USMG5 ▸ SYNPO ▸
MRPS23 ▸ BSG ▸ EIF4A1 ▸ RAB14 ▸ TUFM ▸ HNRNPK ▸ PDCD6 ▸
HSPA1L ▸ MARS ▸ MYO18A ▸ TARS ▸ FANCD2 ▸ NONO ▸ PRDX3 ▸
ESYT1 ▸ CPSF6 ▸ HIST1H1B ▸ HMGB1 ▸ RPS4X ▸ NDUFS7 ▸ SNRNP70 ▸
LETM1 ▸ AHNAK ▸ DAB2 ▸ MAPRE1 ▸ PDLIM7 ▸ FLNB ▸ SF3A3 ▸
FLOT1 ▸ KRT10 ▸ HIST1H3B ▸ ALDOA ▸ HNRNPU ▸ RSU1 ▸ ENO1 ▸
PRMT1 ▸ IRS4 ▸ RPL27 ▸ GNB1L ▸ CUL5 ▸ MMS19 ▸ SLC25A13 ▸
RPSA ▸ HSPBP1 ▸ YWHAB ▸ DYNC1H1 ▸ FLNC ▸ HNRNPDL ▸ VDAC3 ▸
ARF6 ▸ CDIPT ▸ CBWD6 ▸ IGF2BP2 ▸ SEPT9 ▸ TUBB2A ▸ UBR4 ▸
LUC7L2 ▸ DYNLL1 ▸ TNPO2 ▸ TMEM33 ▸ TFG ▸ SLC25A1 ▸ ATP6V1B2 ▸
UQCRC2 ▸ CCT7 ▸ ANXA1 ▸ EEF1B2 ▸ H2BFS ▸ LMAN2 ▸ SPECC1L ▸
CPNE1 ▸ SYNJ2BP ▸ NIPSNAP1 ▸ ASNS ▸ CLPP ▸ RPL35A ▸ RPL15 ▸
NASP ▸ TKT ▸ SACM1L ▸ NCSTN ▸ HIST1H3F ▸ PPIA ▸ COX6C ▸
RPL14 ▸ YWHAG ▸ KRT17 ▸ TMPO ▸ GSN ▸ ATXN2L ▸ MYL12B ▸
TFRC ▸ CLTB ▸ MCM3 ▸ NUP188 ▸ PFDN5 ▸ CD59 ▸ CLTA ▸
MARCKS ▸ SHMT2 ▸ RAB10 ▸ DTL ▸ M6PR ▸ PTBP1 ▸ PSMA4 ▸
ANXA2 ▸ GIGYF1 ▸ MSN ▸ SLC25A6 ▸ DNAJB1 ▸ ATP5J ▸ EPS15L1 ▸
HTRA1 ▸ PSMG1 ▸ SEC23B ▸ RPL26 ▸ TTLL12 ▸ LIMA1 ▸ CBX3 ▸
SSB ▸ GSTO1 ▸ EIF3C ▸ NOMO3 ▸ RPL13 ▸ CAP1 ▸ MYO3B ▸
UBE2L3 ▸ GTF3C1 ▸ CCT8 ▸ COX5A ▸ KPNB1 ▸ PTPN11 ▸ SFXN1 ▸
SC5D ▸ HIST1H3C ▸ CHD4 ▸ RPS3A ▸ PCNA ▸ POLR2H ▸ RPL24 ▸
COPS6 ▸ LYPLAL1 ▸ GALE ▸ HSP90B1 ▸ SSBP1 ▸ STK4 ▸ UBE2NL ▸
RPS14 ▸ SEC61A1 ▸ HIST1H2BJ ▸ XRCC6 ▸ OSBPL8 ▸ KRT1 ▸ TPM1 ▸
ZYX ▸ TRAP1 ▸ PKMYT1 ▸ DCAF12 ▸ RPLP1 ▸ VPS26A ▸ SF1 ▸
MYBBP1A ▸ PRKDC ▸ VAT1 ▸ AUP1 ▸ RPN1 ▸ SUB1 ▸ SLC25A10 ▸
NDUFV2 ▸ DCAF10 ▸ SCAMP3 ▸ XPO1 ▸ MRPL43 ▸ SAR1B ▸ MYL12A ▸
TUBA4A ▸ CHP1 ▸ MGST3 ▸ RPL31 ▸ CCT2 ▸ MEPCE ▸ RPL32 ▸
PSMB1 ▸ GNAI3 ▸ PPT1 ▸ PRPF8 ▸ MAP4 ▸ TTC1 ▸ VPS35 ▸
GTF3C5 ▸ CANX ▸ EPS15 ▸ MRTO4 ▸ DNAJA1 ▸ CPSF7 ▸ PDCD10 ▸
ATP1B3 ▸ MAP1A ▸ RALY ▸ TUBB4B ▸ RPL3 ▸ MDH2 ▸ ZMPSTE24 ▸
CLIC2 ▸ FN1 ▸ EIF2S3 ▸ PSMB2 ▸ KRT8 ▸ TGM2 ▸ G3BP1 ▸
YBX1 ▸ RPA2 ▸ TOP2A ▸ RPS5 ▸ MAP7D1 ▸ HIST1H2AA ▸ GTF3C3 ▸
ECT2 ▸ VDAC2 ▸ ILK ▸ ESR1 ▸ LGALS1 ▸ TCERG1 ▸ DNMT1 ▸
CTSD ▸ CLTC ▸ N6AMT1 ▸ CCAR1 ▸ LRPPRC ▸ ST13 ▸ CCNO ▸
PDHB ▸ PPP2R1A ▸ PELP1 ▸ EEF2 ▸ HSPA6 ▸ POLR2C ▸ NOP58 ▸
NUP210 ▸ NDUFA13 ▸ PFDN6 ▸ NUP205 ▸ MACF1 ▸ UGDH ▸ HDAC1 ▸
RPS15 ▸ APRT ▸ DHRS7 ▸ HIST2H2AA4 ▸ CHCHD3 ▸ SKP1 ▸ EIF3F ▸
HNRNPH1 ▸ ALYREF ▸ FBXO25 ▸ VAPA ▸ PKM ▸ DHX16 ▸ APIP ▸
NDUFA4 ▸ C3 ▸ TNFRSF1B ▸ PSMC6 ▸ UACA ▸ HIST1H3G ▸ HNRNPH2 ▸
TYMS ▸ CLNS1A ▸ CHCHD4 ▸ RPLP2 ▸ LCP1 ▸ RPS8 ▸ EMG1 ▸
CUL2 ▸ NAPG ▸ PPP1R12A ▸ STAT1 ▸ C2orf47 ▸ EPPK1 ▸ RPS23 ▸
KRT2 ▸ CAND1 ▸ RUVBL1 ▸ ITGAV ▸ HADHA ▸ VAMP3 ▸ PDLIM5 ▸
GDA ▸ HIP1 ▸ COPB1 ▸ SCIN ▸ RPL18A ▸ RPL28 ▸ NAPA ▸
RCN1 ▸ PPP2CA ▸ RAN ▸ PSMB6 ▸ ATAD3A ▸ IPO4 ▸ ATP2A2 ▸
NUDC ▸ PSMB5 ▸ RPL36 ▸ DPM1 ▸ GTPBP4 ▸ MLLT4 ▸ COPA ▸
VDAC1 ▸ NHP2L1 ▸ RPL12 ▸ MYH10 ▸ CCNB2 ▸ COASY ▸ PSMD13 ▸
RAI14 ▸ IGF2BP3 ▸ NAP1L1 ▸ PARP1 ▸ EMD ▸ PFDN1 ▸ PFDN2 ▸
GP1BB ▸ DAD1 ▸ MIF ▸ SLC25A18 ▸ SPECC1 ▸ SPTAN1 ▸ TIMM23 ▸
ARPC4 ▸ FEN1 ▸ SV2A ▸ SAP18 ▸ NAP1L4 ▸ DBN1 ▸ ITPR3 ▸
MCM4 ▸ PFKL ▸ SKP2 ▸ VCL ▸ CDKN1B ▸ CLPB ▸ FUS ▸
HIST1H3H ▸ CYCS ▸ BMP2K ▸ CLN3 ▸ NDUFS3 ▸ PGRMC2 ▸ XPOT ▸
DNAJA2 ▸ HSPA9 ▸ C14orf166 ▸ AP2A1 ▸ STAT2 ▸ DHRS7B ▸ TENC1 ▸
KRT31 ▸ LASP1 ▸ ALG1 ▸ NME2 ▸ SLC25A3 ▸ COPS4 ▸ EDC4 ▸
HNRNPM ▸ QARS ▸ RIC8A ▸ TM9SF2 ▸ CCM2L ▸ HSD17B12 ▸ PAGE1 ▸
CNN2 ▸ MAD2L1 ▸ PSMD6 ▸ SMAP2 ▸ COPS7B ▸ VPRBP ▸ CAPRIN1 ▸
SUMO1 ▸ TRAF3IP1 ▸ IPO7 ▸ SNAP23 ▸ PFKP ▸ COPE ▸ PFN1 ▸
ARF3 ▸ MYO6 ▸ FSCN1 ▸ CCT5 ▸ ARL2 ▸ KRT9 ▸ PRPF19 ▸
APOA1BP ▸ ATP5D ▸ H2AFV ▸ HNRNPA2B1 ▸ MAP3K3 ▸ MPP1 ▸ ESPL1 ▸
MTA2 ▸ PCYOX1 ▸ SEC61B ▸ TMED2 ▸ GMFB ▸ DDX3X ▸ VAV3 ▸
DDA1 ▸ AIMP2 ▸ NDUFA2 ▸ RPS28 ▸ TARS2 ▸ RFT1 ▸ RAP1B ▸
PPP2R5C ▸ GFM1 ▸ PPID ▸ RPS27A ▸ CAPZA1 ▸ KRT5 ▸ WDTC1 ▸
GLUD1 ▸ PSMA2 ▸ EEF1G ▸ AURKB ▸ GSTK1 ▸ ANKHD1 ▸ KIAA0368 ▸
RPS10 ▸ USP39 ▸ YES1 ▸ PSMC5 ▸ SRSF1 ▸ CCT3 ▸ HSPD1 ▸
SRSF9 ▸ GSTM1 ▸ PBLD ▸ PAWR ▸ SDF4 ▸ STRAP ▸ C1QBP ▸
HSPG2 ▸ RAB6A ▸ SRSF3 ▸ TECR ▸ UBD ▸ TIA1 ▸ BAX ▸
TIAF1 ▸ CSNK2B ▸ POLR1C ▸ PSMA7 ▸ RCC2 ▸ CBR1 ▸ COMT ▸
TK1 ▸ PGK1 ▸ COX17 ▸ MACROD1 ▸ MCM2 ▸ PRKCB ▸ SAFB2 ▸
SF3B3 ▸ QKI ▸ PSMB3 ▸ SMU1 ▸ ESD ▸ CCNB1 ▸ DDB2 ▸
LRRFIP2 ▸ PRPS2 ▸ LYPLA1 ▸ KRTCAP2 ▸ PHB2 ▸ LRBA ▸ PSMG2 ▸
SUPT5H ▸ SAR1A ▸ DDX18 ▸ PSMD2 ▸ CCNA2 ▸ VTN ▸ EIF4H ▸
PPP6C ▸ ERLIN2 ▸ ILF2 ▸ PSMA5 ▸ UFL1 ▸ MDN1 ▸ RPA1 ▸
CTTN ▸ RPL13A ▸ CAPZB ▸ RPS26 ▸ COX4I1 ▸ SRSF11 ▸ DST ▸
POLDIP2 ▸ CKS2 ▸ KARS ▸ CDK2 ▸ SRI ▸ HMGB2 ▸ HIST1H3J ▸
CUL4B ▸ MAPK13 ▸ SF3B6 ▸ HSPE1 ▸ UBC ▸ CORO1C ▸ YARS ▸
PPP1CB ▸ RPS25 ▸ TXN ▸ FANCI ▸ TUBB2B ▸ UBE2M ▸ VASP ▸
TMX1 ▸ SSR1 ▸ VBP1 ▸ RPS11 ▸ SRSF5 ▸ FAU ▸ PCMT1 ▸
KRT7 ▸ DLST ▸ RANBP1 ▸ SEC22B ▸ PRPF4 ▸ RAC1 ▸ ITSN2 ▸
U2AF2 ▸ GANAB ▸ ANXA6 ▸ HDAC5 ▸ PSMD11 ▸ ATP5F1 ▸ DCAF8 ▸
GPS1 ▸ HIST1H3E ▸ NUP155 ▸ MAPRE2 ▸ UBE2N ▸ RPL19 ▸ CKB ▸
GNB3 ▸ FLII ▸ IPO5 ▸ GDI2 ▸ IMPDH2 ▸ SMARCA5 ▸ NECAP2 ▸
SF3B1 ▸ SLC1A5 ▸ RPL35 ▸ TRIM28 ▸ CSNK2A1 ▸ MRPS6 ▸ SDHA ▸
MLF2 ▸ XRCC5 ▸ AP2M1 ▸ PRKD1 ▸ SMCHD1 ▸ LMO7 ▸ ARPC3 ▸
CKS1B ▸ TMEM109 ▸ EEF1E1 ▸ CYC1 ▸ TUBB3 ▸ DAPK3 ▸ SCAP ▸
DNAJC7 ▸ BLVRB ▸ CRBN ▸ UTP14A ▸ PPP6R3 ▸ WDR36 ▸ PPIH ▸
TIMM10 ▸ KPNA2 ▸ TRA2A ▸ ZW10 ▸ SART3 ▸ SND1 ▸ RCN2 ▸
VAV2 ▸ GSTP1 ▸ ALDH1B1 ▸ HIST1H1C ▸ CFL2 ▸ CRKL ▸ EFTUD2 ▸
CCT4 ▸ FARSB ▸ NME2P1 ▸ RPL10A ▸ HSP90AA1 ▸ GLRX3 ▸ PPP3CA ▸
STX4 ▸ RCC1 ▸ TIMM50 ▸ SARS ▸ NEXN ▸ PTPLAD1 ▸ DHX30 ▸
TMOD3 ▸ HMGA1 ▸ RPL17 ▸ GCN1L1 ▸ OLA1 ▸ ASPH ▸ IARS ▸
UBB ▸ CACYBP ▸ EEF1D ▸ RAB11A ▸ RBBP7 ▸ PNKD ▸ THRAP3 ▸
SYNGR1 ▸ TRIM55 ▸ EPN1 ▸ CALM1 ▸ SNRPA1 ▸ DIMT1 ▸ EIF3K ▸
EPB41 ▸ RPL8 ▸ RRAS2 ▸ GRWD1 ▸ IRAK1 ▸ SPTLC1 ▸ PHB ▸
SCRIB ▸ TOMM70A ▸ DHX9 ▸ ILF3 ▸ GRB2 ▸ CCT6A ▸ SLC25A5 ▸
SERPINH1 ▸ ATP5B ▸ SURF4 ▸ PSAT1 ▸ PSMD3 ▸ SEPT2 ▸ SNRPB ▸
TBC1D15 ▸ YWHAH ▸ GAR1 ▸ RAP2B ▸ SLC25A12 ▸ USP15 ▸ ALDH18A1 ▸
CSE1L ▸ DNAJC11 ▸ HIST1H3D ▸ SMARCA4 ▸ RPL5 ▸ UQCRC1 ▸ BROX ▸
LYPLA2 ▸ VIM ▸ DLD ▸ PPA1 ▸ MRPS34 ▸ DUT ▸ EEF1A1 ▸
BAG6 ▸ CEPT1 ▸ MT-CO2 ▸ TFAM ▸ NCL ▸ AKR1C1 ▸ SRSF2 ▸
RAB21 ▸ PABPC1 ▸ STUB1 ▸ SSR3 ▸ PAFAH1B2 ▸ TTC9C ▸ GID8 ▸
TPR ▸ IDI1 ▸ SNRPE ▸ PSMA3 ▸ RPS13 ▸ TTN ▸ ATP5J2 ▸
Data information
Please see the Gene Interactions Track Manual.