Pathways - manually collected, often from reviews:
BioCarta the information processing pathway at the ifn beta enhancer:
IFN-beta nucleosome complex (RELA-ATF2-IRF5_IRF1_IRF3_IRF6_IRF7_IRF4_IRF2-JUN-HMGB1-PCAF-CREBBP-SMARCA4-SMARCD1-ARID1A-SMARCC1-SMARCC2-SMARCB1-SMARCE1-ACTB)
→
TAFs/TF2A/TBP/TF2F/TF2B/TF2H/TF2E/RNA POL II complex (GTF2A1-NR3C1-GTF2F1-GTF2B-GTF3A-GTF2E1-POLR2A)
(modification, collaborate)
BioCarta the information processing pathway at the ifn beta enhancer:
RELA/p50/ATF-2/IRF/c-JUN/HMG1/PCAF/CBP/hSWI/SNF complex (RELA-ATF2-IRF5_IRF1_IRF3_IRF6_IRF7_IRF4_IRF2-JUN-HMGB1-PCAF-CREBBP-SMARCA4-SMARCD1-ARID1A-SMARCC1-SMARCC2-SMARCB1-SMARCE1-ACTB)
→
TAFs/TF2A/TBP/TF2F/TF2B/TF2H/TF2E/RNA POL II complex (GTF2A1-NR3C1-GTF2F1-GTF2B-GTF3A-GTF2E1-POLR2A)
(modification, collaborate)
BioCarta chromatin remodeling by hswi/snf atp-dependent complexes:
glucocorticoid/glucocorticoid receptor/glucocorticoid/glucocorticoid receptor/hSWI/SNF/NF1 complex (NR3C1-NF1-SMARCA4-SMARCD1-ARID1A-SMARCC1-SMARCC2-SMARCB1-SMARCE1-ACTB)
→
TAFs/TF2A/TBP/TF2F/TF2B/TF2H/TF2E/RNA POL II complex (GTF2A1-NR3C1-GTF2F1-GTF2B-GTF3A-GTF2E1-POLR2A)
(modification, activates)
BioCarta carm1 and regulation of the estrogen receptor:
Estrogen/ER alpha/Estrogen/ER alpha/GRIP1/CARM1/p300(Me)/CBP(Me) complex (CARM1-EP300-CREBBP-GRIP1-ESR1)
→
TF2A/TAFs/TBP/TF2F/TF2H/RNA Pol II/TF2E complex (POLR2A-GTF2F1-GTF3A-GTF2A1-GTF2E1-NR3C1)
(transcription, activates)
BioCarta carm1 and regulation of the estrogen receptor:
TF2A/TAFs/TBP/TF2F/TF2H/RNA Pol II/TF2E complex (POLR2A-GTF2F1-GTF3A-GTF2A1-GTF2E1-NR3C1)
→
MEF2 polypeptide C (MEF2C)
(transcription, collaborate)