Gene interactions and pathways from curated databases and text-mining

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ITGA8 — VTN

Pathways - manually collected, often from reviews:

  • KEGG Focal adhesion: CHAD/COL11A1/COL11A2/COL1A1/COL1A2/COL2A1/COL3A1/COL4A1/COL4A2/COL4A4/COL4A5/COL4A6/COL5A1/COL5A2/COL5A3/COL6A1/COL6A2/COL6A3/COL6A6/COMP/FN1/IBSP/LAMA1/LAMA2/LAMA3/LAMA4/LAMA5/LAMB1/LAMB2/LAMB3/LAMB4/LAMC1/LAMC2/LAMC3/RELN/SPP1/THBS1/THBS2/THBS3/THBS4/TNC/TNN/TNR/TNXB/VTN/VWF → Complex of 21 proteins (protein-protein, activation)
  • KEGG ECM-receptor interaction: VTN → Complex of ITGA8-ITGB1 (protein-protein, activation)
  • NCI Pathway Database Beta1 integrin cell surface interactions: alpha8/beta1 Integrin/Vitronectin complex (VTN-ITGA8-ITGB1) → alpha8/beta1 Integrin complex (ITGA8-ITGB1) (modification, collaborate)
    Schnapp et al., J Biol Chem 1995
    Evidence: physical interaction
  • NCI Pathway Database Beta1 integrin cell surface interactions: alpha8/beta1 Integrin/Vitronectin complex (VTN-ITGA8-ITGB1) → Vitronectin (VTN) (modification, collaborate) Schnapp et al., J Biol Chem 1995
    Evidence: physical interaction
  • NCI Pathway Database Beta1 integrin cell surface interactions: alpha8/beta1 Integrin complex (ITGA8-ITGB1) → Vitronectin (VTN) (modification, collaborate) Schnapp et al., J Biol Chem 1995
    Evidence: physical interaction
  • WikiPathways Focal Adhesion-PI3K-Akt-mTOR-signaling pathway: COL4A2/CHAD/TNR/COL11A2/LAMB3/COMP/COL1A2/FN1/THBS2/COL5A1/RELN/LAMC3/LAMC2/LAMB1/COL4A6/TNC/COL5A2/LAMA4/COL4A1/LAMA3/LAMC1/LAMB2/THBS4/COL2A1/THBS3/LAMA5/IBSP/COL6A2/VWF/TNXB/TNN/SPP1/LAMA2/COL3A1/LAMA1/VTN/THBS1/COL1A1/COL11A1/COL5A3/COL4A4 → ITGA5/ITGAE/ITGAX/ITGAD/ITGA7/ITGA2B/ITGA9/ITGA2/PELO/ITGA3/ITGA8/ITGA10/ITGAV/ITGA6/ITGAL/ITGA4/ITGA11 (activation)

Protein-Protein interactions - manually collected from original source literature:

Studies that report less than 10 interactions are marked with *