Gene interactions and pathways from curated databases and text-mining
YBX1: top 25 interacting genes (chr1:43148065-43168020)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only YBX1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-YBX1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with YBX1, not among the Top 25
Other genes interacting with YBX1. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

GP9 MMP2 IFNG COL1A2 AKT2 SLC22A3 AKT3
TNF HRAS EIF4E HSPD1 PDGFB CD44 AKT1
HIST1H2AH RPL11 TENC1 PC RAB10 GZF1 FBXO33
TUBA4A EPHX1 SF3B4 HIST1H2BJ NBN ACTR3 RPL7
UBE2C GAS8 UBC AHNAK PRDX3 SETD2 CNOT6L
EIF4A3 ACTBL2 YWHAZ SCRIB RPS17 ARF4 PSMA6
TCEAL1 DNAJB11 FLNB TUBB6 TNPO1 HDAC1 RPS6
RALY HNRNPK MYL12B MAGOHB RPLP0 AFG3L2 TTC37
IRS4 ZFP36 BAX AMOT DYNLL1 HNRNPA1 PTRH2
PCCB CLTC HIST1H1A ACTA2 HABP4 FBXO2 ARRB2
MRPS7 TRIM11 ZCCHC3 RPL19 CKAP4 MCCC1 ILF2
ENY2 FANCI PRKD1 IQCB1 RPL38 DIAPH1 RCN2
MAP4 PSMC2 SEC24C RPN1 HIST1H2BK TUBB8 AGO1
SLC16A1 HIST1H1D TMEM109 RPS12 NAPA ZNF33B TSN
ABHD12 RPAP2 HIST1H2BH GUK1 KHDRBS1 VAMP2 MEPCE
SERPINH1 SART3 SNRNP40 ICAM1 DLD MYH14 WWTR1
MRPS5 POLR2A CCT3 HNRNPDL ACTC1 ESCO2 FAM186B
DHX36 DGKZ ATP5I TAF15 CAND1 TSR1 GMPS
TNPO3 PSMA3 ARCN1 SNRPD3 COX4I1 UPF1 RAB3C
SLC25A4 NFYB PXN BRCA1 CSNK2A1 AURKB SUPT16H
DBT TGM2 WRN TOP1 SLC6A4 XPOT HNRNPA3
MRPL27 SUPT4H1 HIST2H2AB KPNA3 TTC9C RPL7A RPS13
ZC3H13 KIF20B U2AF1 CHAMP1 GNB2L1 M6PR UFL1
HSPA6 MRPL12 WDR5 PPP1CA SNRPA1 CPNE1 GEMIN2
MLLT4 GAR1 CNOT10 SREK1 TMED9 HIST1H2AE C3
SSRP1 TCEB1 FOXP1 EEF2 FLNA USP9Y NPM1
TARS2 CHCHD3 KRT9 RPL18 MCF2L2 KHSRP PCNT
RAB14 SRRM1 RBM12 SLC25A10 HIST1H3E BRIX1 SLC25A6
TECR UBE2N KARS MRPL20 PABPC4 RPS5 CHTF18
SVOPL PCP4 TFRC RPS10 LRPPRC PSMB6 DDAH1
SACM1L RALYL MCM3 ITGA5 TPR ACLY STK24
PTS PELP1 RANBP1 DCD CANX ZYX ERLIN2
HIST1H3H PNN ZCRB1 NDUFAF3 TUBA4B NAT10 ANGPT2
HIST1H2AB YWHAQ DDX3X DNM1 STRAP HSP90B1 ERH
HIST1H2BD MME NFIL3 NEFH EIF3K TIMM10 NQO2
CD4 AP2M1 JUP HIST1H3F S100A7 MPP1 SPRR2B
PABPC3 PA2G4 CLIC2 IQGAP1 HIST1H3A ATXN10 RNPS1
PRMT5 CDYL EIF5 GRB10 PIK3CB HSPA5 EIF2B4
EIF4A2 MRPS15 HIST1H3B BMI1 ACTG2 CELF2 TOMM70A
CYB5B LTN1 SNRPB2 HIRIP3 SKP1 TUBB3 MAPK13
EIF2S1 BPTF RPL8 SLC4A5 EIF3F TPM3 PABPC1
LGALS3BP CHCHD6 PITX2 XRCC6 SUB1 PGAM4 CEP350
GFM1 SMURF1 RAP1B RPL39 USP34 TK1 CBWD6
ADNP C14orf166 NAA15 PCBP3 SFPQ PEBP1 COMT
NHP2L1 PCGF5 TMED2 MRPL37 VCL BPNT1 USMG5
ATP5C1 TJP1 RPL9 GDI1 MCM2 ARHGAP29 RPS10P5
VAT1 KRT5 SPRR2D EIF3CL SDHA CAP1 FLG2
PSMD6 SLC3A2 COPS5 FYTTD1 SSR4 SSB SEC61A1
COPB1 IRF1 MYC LOX ACTG1 ESYT1 IGHG1
RPL18A SLC1A5 SLC37A4 MRPL44 MRPS6 HBA1 CACYBP
RPN2 WWP1 H2AFV FAU PPP1R3A PNKD EIF4B
PRKRA HSD17B12 HLA-C RCC1 LETM1 RPL35 DSP
DYNC1LI2 TIMM23 NUP188 MT-CO2 PARP1 NCBP1 PSMD2
UBB CYB5R3 DPYSL2 MRPL2 SYNJ2BP RPS15A P4HB
STUB1 UBA1 CRNKL1 GART CCT5 MRPL9 SF3B2
RBBP4 ITCH RC3H2 AMOTL1 SUGP1 DACT1 TMED7
TUBB4B MRPS23 LAS1L IFIT1 MACF1 MRPL17 BYSL
POLR2E EIF5AL1 COPA ACOT13 MRPL38 MRPL15 CNOT7
KRT31 IARS SRPRB RPL35A PPP2R5C OXCT1 MRPL13
ARF3 ATP5A1 POLR2D SH3BP4 RPS21 SNRPC SCO2
RPS24 SRSF5 CCT8 CPLX1 SON WIBG PICALM
RAB21 PPP6C DDA1 CORO1C YBX3 ZNF346 SMARCC1
PSMD13 SNRPF ZNF326 YTHDC2 IGF2BP2 PRPF4B GSK3B
PRDX1 ZC3H11A HIST3H2A IRAK1 OSBPL8 RPS16 RBMS2
STXBP1 HIST1H2BN RPL30 EIF3H SRPK1 TXN CUL3
ETV3 ARNT RPL14 RPL10 RPL26L1 AGO4 MRPS31
TWF2 HMGN5 SNRPD1 QKI MAX FMR1 CLTB
PCF11 SMCHD1 MRTO4 MRPL3 PLOD1 MAG KANK2
EEF1B2 PRPF4 PAPOLA MRPS14 ATP1A1 BCAP31 ENO3
HNRNPCL1 RPA2 KRR1 S100A8 BRWD1 PTPLAD1 NCBP2
RPS7 UBE2V1 DNAJB1 RIOK2 PSMC6 NOP58 GIGYF1
H2AFJ KRT10 ELAVL1 PSMA2 PCGF6 PDLIM7 KDM1A
SRSF3 AP2B1 DDX3Y NONO DNAJA2 CEP135 TNRC6A
FDFT1 UBR1 NCOR2 SEC16A TRA2B CBX3 G3BP1
YWHAH KRTCAP2 PRMT1 POLR2B PPP2R1A PUM1 DAB2
POLR2M STAT2 ATP5H IMPDH2 RPL31 SLC25A18 CNOT8
FERMT3 CCT4 GLUD1 GNAI2 LDHB PPP1CB BASP1
EIF3D EPS15 PSMB5 CUL4B BCLAF1 RPL36AL CHCHD2
PFKP RIBC2 SMAP2 HSD17B4 KPNA2 SCAF1 RPL27
RAD17 TOPAZ1 HIST2H2BE EIF3M TRA2A PRPF8 CHP1
ATP6V1G2 PFN1 HMGB2 SYNGR1 ANXA1 STX4 CLPB
DDOST PPARG SPRR2A IGF2BP3 UBA52 CHAF1A DHRS7
TCEB2 SLC25A1 GRIN1 CKAP5 SNW1 ATP1B3 PRKRIP1
ERC1 ACACA CMAS HNRNPAB PSMC4 PCYOX1 EIF2AK2
EIF3L SV2A FH SFXN1 GTF2I CWC15 PWP1
AP2A2 HIST1H3D TARS ZMPSTE24 RPLP2 CACNA1C CCT6A
VAPA MAMDC2 GIGYF2 IREB2 ECSIT ESYT2 TUBB2B
TCOF1 ZNF717 TIMM50 ACTN4 JAK1 KRT16 SAFB
EIF2B2 RPS18 NOS2 MRPL1 SRSF10 STIP1 TNKS1BP1
EIF5A GID8 STOML2 PCBP1 CSNK2A2 CCDC9 RPS27
PDHB RPS29 CAPZB ATP5B PRPF40A RPL13A RAPGEF2
SNRNP25 HNRNPF TPI1 SDF4 EIF5A2 PTPN11 RSU1
RIF1 AARS OBSL1 DNAJC7 YWHAG HIST1H2BB TFAP2A
HSPA9 SNRNP35 FAM151B XRN2 UBR5 PCGF2 RAP2B
THBS1 HIST1H1C MAP2 HSPA1A MIF EEF1D PRPF6
RAE1 DNAJA4 ZRANB2 DSG1 TUBB1 RPS9 HDAC2
GTF2F1 LPCAT2 HSPA8 ENO2 SRI HIST1H1T EIF2S3
SPRR2E RPL26 PHB2 POLR2C RPL21 NUP210 AGO2
SRSF6 STOM COPE WWP2 HADHA MSX1 HNRNPA2B1
AP2A1 PTCD3 NECAP2 MSR1 RAB5C SMURF2 EEF1G
NOLC1 RPL23A SRSF7 LCK SPATA24 AKAP8 LDHA
EWSR1 TUBB2A AHCY EXOC4 RPL27A RSL1D1 RPAP3
FLNC SAP18 ACACB SF3B5 PFDN2 MDN1 NUDC
RAC1 H2BFS ITGB1 C2orf47 IFIT2 AGO3 SLC25A12
IDI1 VPS28 SNRNP70 LSM2 LCP1 OLA1 CCDC124
PABPN1 PRPF19 PKM COX6C SLC25A13 EEF1A1P5 OXSR1
DHRS2 DDX18 MDH1 CTNND1 CCT7 RBMX CNOT2
PAN2 MZT2B NDUFA8 EXOC1 MYH10 NDUFV2 EEF1A2
ALYREF NEDD8 SNRPA CKM FHL2 GALE HNRNPU
GLRX3 IPO5 HNRNPH2 CKMT1A NUP155 ADIPOR1 HIST1H2BL
STAU1 MAPK1 SF3B1 PSMA4 HADHB DHX57 SH3BGRL2
LRRC59 CLPP LYPLAL1 STON2 NHP2 NUDT3 CEP290
RAB7A LUC7L2 EIF4EBP3 DDX5 RPL37A NEDD4 VPS35
CASC3 SNRPB DAD1 GTPBP4 IL6ST LMAN2 SNRPG
VAMP3 PIP HIST1H2AJ SRSF9 BOLA2 IGF2R PHKG2
TMX1 JAM2 ZMAT5 NUP205 UBE2M IMMT LDHAL6A
HLF MLF2 RPS6KA3 GRPEL1 SCAMP3 SPRR2G ARL8A
BAG6 CCAR2 MYBBP1A UBR4 VIM RPLP1 SCML2
RPS19 EIF4H ATP6V1E1 DDX47 G6PD RPL5 RAB1A
NAPG IFIT1B SLC25A11 CALU RING1 SDF2L1 RTCB
SRRM2 FEN1 POLR1C LCP2 SCYL2 SRSF1 GLA
POLR2L GALK1 MOGS MRPS16 RAB6A NEFM PPID
NUP93 SEPT9 TXNL4A RPS15 ZW10 LRBA MTA2
MAP3K14 MRPL40 PHC2 DAP3 ACIN1 XPO1 APOBEC3C
CALR PHB HIST1H2AD RRBP1 TMPO TAGLN2 RAB11B
UBAP2L RNF130 PTBP1 TRIM28 CBX8 HIST1H2BM PSMG2
SYNCRIP FARSB ANP32B FN1 CPSF7 PPP2R1B BCAS2
RPS4X VPRBP ATP5J2 RNH1 QPCTL SSR3 CAPZA1
CBR1 NIPSNAP1 KIAA0020 UBD USP11 EPN1 TNRC6B
ITGA4 RAD23A TUBB4A COX5A CNOT11 TLN1 EBNA1BP2
TF DHRS7B CFL1 LTV1 DDB1 PRKCB PGAM2
PCID2 EIF3A PPP2CA SNRNP200 BZW2 APLF POLDIP2
KRT2 QARS HIST2H2AA3 TRAF6 HM13 MRPL16 HIST2H2AC
ULK2 MRPS22 KRT18 YTHDC1 EEF1A1 LMNA CRISPLD2
NDUFS3 SNRPE IQGAP3 RPS26 ERBB2IP CCT2 APC2
GNAI3 SPAG9 EPB41 CYC1 TMED1 PURA ASPH
CHTOP PSMB1 ELP4 GSTM1 RPL36 FLOT1 PFKL
RAN APEX1 FYCO1 NAP1L1 YES1 ELL3 ARHGEF1
HIST1H2AA UPF3B CNN2 UCHL1 PI4KA CPT2 FAM98A
ANXA2 MAD2L1 YWHAE ATP5L RPL15 DIMT1 HSPA1L
KPNB1 RPL17 PSMB2 DHX15 HNRNPA0 SIPA1 VDAC1
PCGF1 ANKRD2 DNAJB12 RPL6 BAG2 DHX8 NDUFS2
GEMIN4 HNRNPR SF1 KIAA0368 RPL24 CUL7 VASP
HNRNPD HNRNPM PRKCDBP MYO1C RPL28 DIAPH3 YBEY
CBX6 IGF2BP1 HNRNPL SLC25A3 SQRDL VEGFA NF1
EP400 ZFR RPS20 LARP4B PIK3R2 PSMB3 TRAP1
SLC25A31 NDUFA13 TOMM22 POLR2H CTNNB1 RAB35 CDC40
SLC25A22 MARCKS IPO4 ITGA11 ANP32A RPL4 GSTK1
AUP1 DDX39B FANCD2 NAP1L4 EIF3C PGK1 THRAP3
PCNA ITGAV RNF149 PSMB7 SF3A1 RANBP9 HIST1H3C
CLPX TICAM2 PSMB4 ZC3H14 VPS26A FNTA POLR2G
EIF5B PCP4L1 TCF12 DYNC1H1 RUNX1 RPL3 SEC61B
FASN TTLL12 LIG3 ATP2A2 AIMP2 DNAJC11 KRT1
NDUFA2 TAF1 RPSA SAR1A IGSF8 HMGB1 TFG
PAFAH1B2 LYAR RPS14 ATP6V1B2 CALB1 IFIT3 RCC2
ABCF1 AGK PCBP2 CSE1L ARPC4 PGD WDR77
PTMA EMD CORO1B SYNE1 CMYA5 CUL2 TUBA1C
RAB1B ARF6 CKMT1B PRDX6 DHX30 GSTO1 CAB39
RPL13 LGALS1 NUDT21 CCDC85C ALDOA TMEM205 SF3A3
ARL2 TMEM33 MARS SRSF12 SUPT5H CDIPT CUL1
MRPL49 RBM39 TUFM MRPL23 GAPDH PTGES3 SGPL1
NMT1 RPS8 PCGF3 GPC4 HSPB1 TM9SF2 TFAM
BMP2K RBPJ POLR2K RFT1 HSPBP1 LAMP1 LARP4
HIST1H3G FBXL13 HNRNPC RPS11 PHF5A RBM22 SEC23B
ERCC6L2 FBL ARPC3 MAP1B SET KRI1 RPS25
YTHDF2 XRCC5 PPAN USP15 CKB MCCC2 LMAN1
MRPS28 LARP1 ANXA6 SMN2 RUVBL1 PIK3R3 ZBP1
CTPS1 SRSF4 YWHAB CUL9 TP53RK SSBP1 URI1
DDX17 PDLIM5 ADAR PYCR2 PRKDC WBP2 SLC25A5
MCM6 SRP14 POLR2I NISCH NELFB FAF1 PPP1CC
LASP1 PTRF BARD1 SUCLA2 RBBP6 BOLA2B MAGOH
PGAM1 PSMA1 TUBA1A GANAB CCDC47 EFTUD2 HSD17B10
FSCN1 RPS23 MRPL19 DNAJA1 EIF4A1 PRPS2 SF3B6
HNRNPH3 EPRS TNPO2 ARRB1 CPM PLS3 MOV10
EP300 UBE2O DPM1 PGGT1B BSG USP39 RC3H1
NACA KIDINS220 CNTNAP2 SEC22B SF3A2 DNMT1 RPL23
SNRNP48 HIST1H1E MRPS35 SF3B3 ATP5J KRT14 RUVBL2
RPS2 PGRMC2 DYNC1I2 RNPC3 RBM28 ILF3 HIST1H2AG
ATP5F1 RARS RPS3A USP9X SPTLC1 CSNK1A1 ATP5O
RGAG1 SYN2 CLIC5 NUMA1 BZW1 CALM1 PPP2CB
SRSF8 C1QBP MYCBP UBE2L3 WDR6 GTF2F2 CAMK2D
MYL12A MYH9 EIF3B H1FX NOA1 KHDRBS2 RPL32
ARID1A ACOT8 SND1 CPSF6 HIST2H2BF NDUFA5 NOMO3
GNAI1 CEPT1 LSM12 NBPF8 MAPRE1 XAB2 SLC5A3
PSMA5 PLRG1 PHLDB2 SIRT1 CAD HIST3H3 NOP2
HRNR FOSL1 U2AF2 MLLT11 HIST1H3I GTF3C5 UBE3B
CSNK2B SNAP23 PGAM5 VDAC2 CNOT3 SMC4 GDI2
RBM8A TUBB HIST1H2BA CWC22 NDUFA9 ANKAR FLOT2
LEPRE1 ZMYM4 HIST3H2BB RAD21 ACTB GTF3C3 MECP2
STXBP3 VDAC3 RNF2 ATP5D AKR1C1 CSNK1E ZRSR2
PPIA POLR3A HIST1H1B SMTN TUBA1B MRPS34 MRPL48
HSP90AA1 SERBP1 PGRMC1 MMS19 RPL36A CLTA NOP56
PPP3R1 NIFK TKT CDK9 TTC1 DDX6 TWIST1
PAICS CDC5L RPA1 SMU1 MDH2 RAB11A SPTBN1
NCL EMG1 POLR2J RPS28 MGEA5 AFAP1 ALDH1B1
FAM162A PPA1 NARS AHDC1 RPL34 GNL3 ALB
MRPS27 NFX1 PRRC2C TOE1 HSP90AB1 DCAF12L2 RFC4
SSR1 GCN1L1 BROX ENO1 TMED10 XPO5 LAMA3
DHCR7 RBM10 CHCHD2P9 MATR3 PSMG1 IPO8 NABP2
HNRNPH1 PPIE CALCOCO2 ESF1 EIF3I RPL10A SEPT2
NKRF GNB3 RPS3 CNOT1 APBB1 SMN1 PHGDH
CPSF1 CMSS1 NDUFAF4 CBFB ECH1 QDPR SRP9
RPL29 FKBP8 ALG1 FKBP3 ALDH7A1 HIST1H2BO HIST1H2AC
NDUFA4 COX17 INSR DDX21 USP7 RPL12 PSMD11
PCCA RPS27L CASC5 RCN1 UQCRC2 CLNS1A FAR1
SRSF11 MSN AIFM1 HIST1H3J OPA1 HMGA1 HIST2H2AA4
WDR61 DDX39A PAFAH1B1 DDX1 HSPG2 PUF60 RQCD1
POLR2F UBE2K MRPL53 PDIA3 LSM3 ATXN2L NASP
PAXIP1 UQCRC1 ERC2 PSMA7 HIST1H4A SMAD6 PEA15
PDAP1 SNRPD2 SRPK3 SRSF2 ST13 RPL22 AQR
MRPL43 ZNF33A MBL2 EIF4G3 TRIM21 NDUFS7 DTD1
EIF3E PDIA6
Data information
Please see the Gene Interactions Track Manual.