Gene interactions and pathways from curated databases and text-mining
HDAC1: top 25 interacting genes (chr1:32757707-32799224)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only HDAC1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
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Less-frequently mentioned interactions with HDAC1, not among the Top 25
Other genes interacting with HDAC1. Mouse-over to show number of abstracts or databases. Sorted by article count (sort alphabetically).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

CASP8 HDAC3 CASP9 IL8 HDAC4 CASP7 SFN
IFNG PTGS2 IL2 HLA-DRB1 SIN3A SLAMF1 JUN
RUNX1 WNT2 WNT1 KRT27 CDKN2A E2F1 ESR1
WNT3 WNT6 WNT11 AKT1 WNT16 TGFB1 SP1
IL1A WNT4 AKT2 AKT3 TCF23 GTF2B CEBPA
TCF19 TCF7 TCF12 CDK2 BCL2 ESR2 TCF25
TCF21 TCF15 TCF20 PPARG TCF4 TCF3 HDAC7
TCF24 CDK16 SAP30 STAT1 NOTCH2 KLF4 SIRT1
CDK3 NOTCH4 STAT3 LBH CCND1 CDK19 CDK12
TNF HLA-DRA CDK5 CDK10 HDAC6 CXCR4 SUMO1
PRKACB ARF5 CDK13 PRKAR1B HDAC10 ARF1 MMP9
PRKACG PRKAR2A CDK4 CDK6 CDKN2B VEGFA NOTCH3
CDK9 PRKAR1A CDK18 CDK14 CDK15 RUNX2 CDK7
CDK8 CDK20 DNMT1 PRKAR2B CDK1 CDK17 HDAC5
PDCD5 PIK3CA MMP3 SRC PIK3R1 MAPK10 CREB1
CDH24 SUMO2 APCS MMP14 MAPK9 PCNA CDH13
CREB3 MAPK1 AR TGFB3 CDH18 MAPK12 HDAC8
SUMO4 CDH12 CDH7 CDC20 MDM2 NOS3 CDH5
HIF1A NAB2 IL1B IGF1 BRCA1 PTBP1 MEFV
MAPK13 CDH22 SLAMF6 CDH11 CA2 YY1 CDH6
PDCD7 MAPK14 BMP1 SETD2 PDCD11 BMP4 PDCD2
NR4A1 SAP130 CDH4 FXN BMP2 HDAC9 CDH10
HIPK2 CDH16 TNFSF10 RB1 CDH15 CDH19 ARID4B
CD8A MAPK15 MAPK3 ARF3 RECK TGFB2 FAS
CDH3 PLAU CREB5 HDAC11 IGF2 MMP13 ARF4
HSP90AA1 IL4 MYC CDH9 CDH26 PDCD10 SUMO3
SPP1 MMP28 ARF6 PI3 SUDS3 CDH23 BMF
MAPK7 PDCD4 IL10 CDH17 PDCD1 CDH8 KDM1A
MAPK6 RCOR1 MAPK4 PDCD6 MAPK11 CDH2 CDH20
MAPK8 SOD2 BMP7 GTF2F1 CTNNB1 JARID2 PTEN
SLC22A3 SLAMF9 SLC2A4 SIRT7 MMP8 IL9 MMP21
DYNLL1 OLR1 BAX MMP11 SLAMF8 KLF8 GP5
RNF19A RELN CEBPZ SIRT4 COA1 MMP2 POLR2A
MICA TERT CREBBP TNFRSF10B COA5 MMP12 PTBP2
CLU SLAMF7 TGFBR2 BCL3 COA3 MMP27 POLR2J
CDYL GP2 MMP15 SMAD3 TAF1 MYH14 ABCB1
CCND3 XRCC6 CTBP1 TLR2 H2AFX ICAM1 POLR2I
SERPINB5 CEBPD IL12A POLR2E GPI POLR2F MMP20
MMP24 KRT36 RCOR3 RHOB MMP10 KAT2B CTDP1
MMP26 FOSL1 BMI1 EP300 FGF4 WNT5A SIRT2
RBPJ USO1 RREB1 NR5A1 POLR2G UCN POLR2L
MCAT MMP17 CD8B CD34 IL5 NEUROD1 TXN
MMP25 BMP15 CDKN2D MMP7 MT3 POLR2D OPN1LW
GP9 POLR2H HNRNPH1 IL12B FGF2 RARB GSK3B
GGT2 BMP6 SOD3 PRL HMGB1 MMP1 MMP16
BMP5 MMP19 SOCS3 ID1 SIRT6 SUZ12 E2F4
ABCC1 MCOLN1 POLR2C GTF2F2 CD40LG HSPA5 TMED7
ZNF217 RPAP1 PTMS IKBKB POLR2K CSF2 EGF
ALOX15 PDLIM7 BMP3 IGFBP3 NAB1 BCL6 SOD1
ADAMTS5 POLR2B CHUK COA6 REST ERBB2 NOS2
NEUROD4 GAL ZEB1 ZMYM2 ADAMTS1 SIRT3 NEUROD6
GP6 FGFR3 SIRT5 HNRNPF BMP10 KIT KDR
INS VIM NEUROD2 COA4 MBD2 IFNB1 NGF
GATA1 FOS IL13 CCL2 IL18 SDS MYO9A
RUVBL1 SQRDL SLC25A5 HCFC1 SUPT16H EIF3E ACTR3
LRPPRC OAT RAF1 IRF5 ADH5 GATAD1 SF3A3
SMC2 AP2M1 PFKL PDAP1 PSMG1 IPO4 SRI
REL SHOC2 HTATIP PBX1 CPNE1 TLE3 POLE
TPR PPA1 HMGB2 RXRB XRCC5 C7orf50 TUBG1
YES1 HIST1H3H SNRPD3 IGF2BP1 DIAPH1 ACADM LYL1
TAL1 CDK2AP2 CAP1 RUVBL2 SNRNP200 CHD5 AHNAK
LMNA KPNA6 CCT8 SMARCA5 DYNC1H1 RUNX1T1 RPL17
SRSF7 ZNF512B HIST1H3E PFKP RAN IGF2BP3 WDR77
EMD TOP1 HMGA1 MAFK MIER1 HIST1H3J PRMT5
CELF2 NR2F2 PSMC4 CNN2 SATB1 IFRD1 MPP1
LARP7 CBX1 LMO7 ITGB1 MT-CO2 SETD8 SMAD5
HIST1H1C RPL34 BAG2 CLTB RBM12 GAR1 ATP5B
GMPS EIF5 DZIP3 NFKBIA OLA1 ILVBL GLI1
HUWE1 SLIT2 EIF3K ASH2L MMS19 MAX AKAP8
TRAF6 HIC1 CBX3 PARK7 PI4KA RFC5 TAB2
TMEM54 SALL1 IQGAP3 RPS15A BCOR TFAM RAD9A
NDUFS1 RBPJL MIER2 EEF2 IKZF3 SMC4 RPL15
PSMB2 ARPC4 QARS PSMA1 SEC61A1 CSNK2A2 BHLHE41
MED4 ETHE1 P4HA1 IGF2BP2 RAB7A FLNB DIMT1
NFYA BMS1 DEK SSBP1 DNAJA2 PCBP1 TK1
GTF2I SF3A1 TKT TTC27 SRSF5 EEF1A1 NR3C1
AP2A2 MDH2 COPB1 KRT2 RFX1 SMAD2 KPNA3
ABCF1 USP15 RFC1 PWP2 DHX15 CORO1B RNH1
HNRNPDL CCND2 IKBKAP HIST1H3I LGALS1 EIF4A1 MRPS23
NDUFS2 PRMT1 RPL31 PSMD3 PPP2R2A TUFM CBX8
DNAJA1 PGAM5 XPOT MEF2D SEC61B BUB1B LDHB
YWHAE RPL4 NFYC HIST1H3D HSPA1A RPA2 NFIX
EFCAB6 SQSTM1 WISP2 VPS26A BUB1 ZBTB16 ZNF395
CEPT1 TGIF2 NAPA ETFA PPP1CC SMO HIST2H3A
STAT5A CORO1C PPP2R1A SEC23B GTPBP4 BROX HIST2H2AA4
GLUD1 PSMA4 PRKACA HNRNPU ELK1 TBL1Y DNMT3B
TMPO ADNP STRN3 PELP1 PSMB5 SEC22B SATB2
ARRB2 EIF3A NOP56 GSTK1 MYO5C AKAP8L NKX3-1
SUB1 RPL35 ZNF827 NKX2-5 RPL12 PRPF4 FBL
LSM12 CAPZB RPS25 NOP58 ZNF281 NPM1 RICTOR
AKR1C1 HADHA DDIT3 PSMC3 LASP1 MTA3 RPL13A
DAXX MOGS INTS10 HELLS FAM60A GLI2 RPA1
OVOL1 HSP90AB1 ALDOA TRIM21 MBD1 RPL7 RPL27A
KIAA0368 MBD3L1 TTLL12 CHD2 ST13 NARS DNMT3A
EFTUD2 RABEP2 PLAGL1 UBE3C PAAF1 NUP98 CABIN1
SUCLG1 ACACA BAZ2A PRPF6 GSE1 PTGES2 PRDM5
CCT5 GTF3C3 TRIM24 GLRX3 POLRMT ZGPAT HIST1H3F
GCDH NR1D2 EPS15 CBX5 PRKCB KRT10 FDFT1
RAB18 KRT5 PPP6C ZW10 PLK1 USP39 KDM4C
RPL10A EBNA1BP2 CCT2 TGIF1 RAB35 GCN1L1 RPP30
RPN2 SSB TSR1 PSMA3 NOP2 IKZF1 HSPB1
FOXG1 TLN1 RPL21 SIPA1 EID2B ZC3HAV1 RSU1
TFRC TUBGCP2 LRBA SEPT9 MKX RSL1D1 SSRP1
PSMD13 MYL4 CCT4 THRB DDX6 NCBP1 WIZ
SSR4 PPARD HIF1AN INSM1 CS PSMG2 SET
FARSB BRCC3 BRIX1 HSPA6 PSMD4 MRPS6 GTPBP1
RERE TRRAP FLOT2 EXOSC2 MSH6 TUBB6 POLR1C
MYOD1 HSPA8 EEF1A1P5 DNTTIP1 OGT U2AF1 SYMPK
CDK2AP1 ALYREF PRPF19 MAML1 HUS1 RAP2B RPL5
SS18 NUP62 NFKB2 USP24 GFI1 VHL NR2C1
MRPS22 ERG TPD52L1 SRSF9 MSH2 PRDX6 ATP2A2
ITGA5 RBFOX1 PHGDH RRP1B EIF5B HIST3H2BB PTPN14
C16orf87 NAA15 EXOSC3 PRKDC RAB11B NCL GSG2
EXOSC6 PHB MEN1 RPL35A NHP2L1 SLC25A11 TXNDC5
DDB2 IQGAP2 TFCP2 DDX21 EEF1A2 FLOT1 SRSF3
BANP ZMYM3 HEXIM1 SLC25A3 ARHGAP35 IDH3B RFC4
MRTO4 UBE2L3 PSMB3 EID3 KRT31 SEPT2 RALY
ZMYND11 NUP214 SCRIB DHX30 RPS24 RAB5C TRERF1
EPB41 H2BFS HIST1H1D TUBA1A HIST1H1E BANF1 SPTAN1
RAB10 SNW1 ELMSAN1 SUV39H1 PSMA7 E4F1 KAT5
PRDX3 PSMA6 SMARCAD1 MAD1L1 EIF4ENIF1 BEND3 MBD4
MORF4L1 RFC2 KPNA1 ITGA4 CLIC5 NDUFV2 BACH1
KPNA4 SETDB1 ESD MEF2B DDX3X SRRM2 DGCR8
TTF1 PHF14 LCP1 PADI4 PRRG4 CHTF18 ANXA5
HIST1H2BJ KANK2 EEF1B2 TNRC18 HIST3H3 VBP1 HIST1H2AA
LRRC59 PKM SMARCD3 SPTBN1 BMP2K ABCB7 MYT1
ERCC3 EXOSC10 CAND1 BZW2 MAML2 NUP54 POLDIP3
U2SURP ELAVL1 HIST1H2BL FN1 PSMB4 C14orf166 RCHY1
SLC25A13 STRN EIF3I RCC1 SKIL CPSF2 DDX50
PSMC6 KIF2A BCL11B PPP2CA MYBBP1A ATF3 HNRNPK
IDH2 RPS15 HINFP HIST1H3B NRIP1 RPS23 FGFR1OP
UHRF1 GABPA COPG1 BCL11A DPY30 MBD3L2 TFAP4
PICALM SNAI1 EIF4H DNAJA3 KIDINS220 KIF4A RPS11
HBP1 PDLIM5 TCP1 ERLIN2 SAP30BP GRWD1 TWIST1
C7orf26 ZFPM1 GLI3 HIST1H4A EIF3F ZYX BAG6
ESYT2 TADA2A SMAD1 BAHD1 RPL32 NACA TCF1
STAT2 HIST1H3C RPL24 CPSF7 RXRA CLTC RAB11A
ATR PPID LMO4 ZNF76 SNRPA TUBA4A CKAP5
ESCO1 MRPS34 AIMP2 HIST1H3G SPTLC1 CIR1 MBTPS1
ATP5J2 NDUFA5 HLX EID2 KDM5A FBXW8 STIP1
BUB3 TAF1B GMNN KLF1 PSMB1 SMEK1 DACH1
MS4A2 DROSHA SMC3 H3F3A MAGEA1 TLE2 ARL2
ACOT8 PFDN5 TRIM33 CFL1 MARS SUPT5H HIST1H2BK
IMPDH2 MYO9B EPN1 ASS1 RELB SLC25A12 MCFD2
PRDM4 SF3B6 CDK5R1 NDUFA9 ZNF687 PFDN6 ACLY
HIST1H3A DPM1 SRSF2 HNRNPA3 NR2E1 COPG2 PPP1CA
RAD21 TLE1 IPO13 RARG PSMD2 NUP210 FLNA
PLK4 CHD1 RPN1 FERMT3 SENP1 UBE2M FEN1
LDB1 PDIA6 MAP4 BANF2 CNOT1 CDC5L SMC1A
PRKG1 ALDH18A1 SARS HES1 SSX2 EIF2S3 HSPA4
UBASH3B STAU1 ITGAV DDX17 RPS10 PCGF6 UBR2
MCM3 KARS RPL6 ATF2 NAPG APEX1 DDX5
SNAI3 RAE1 GTF3C2 STAG1 PAPOLA SMURF1 ARPC3
ZNF121 SSR1 IPO9 PPARBP STOM GSTO1 SUFU
UBTF HIST2H2AA3 GART PHF12 PSIP1 H2AFV ING1
CCAR2 SNRPD1 IRAK1 HIST1H1B ADD1 NDUFA8 RTCB
RANGAP1 GNAI3 POU2F1 SYK EIF2S1 UBC SRPK1
TTC9C AP2B1 IRS4 MAGEA6 ANP32B SNRPB MLLT4
DACT1 SMCHD1 ARHGEF1 HR TUBB4B YBX1 LDHA
SNRPE AASS ERCC6 SPI1 HOXA11 IPO5 TRMT61A
ALDH1B1 ZNF592 IDH3G PPP6R3 ZNF609 UBE2I TARS
DEC1 RPS26 CCDC6 IQGAP1 SF1 VAPA MCM2
MAPKAP1 CITED1 CYR61 CAMK2B SFPQ CPSF6 MYL6
PITX2 IDI1 GDI2 STXBP3 KRT1 YWHAH TBL1X
VCL TFDP2 PLOD3 DDX18 ENO1 PRPF8 GALE
SEC24C NUDT21 ATAD3A AP2A1 AATF PSMA5 PRDX1
DDX47 TPM3 DNAJB1 C1QBP APOBEC3C MIER3 THAP11
CLNS1A VPS28 JDP2 TAF12 ATP5C1 HIST1H1A MAPRE1
SAR1A KDM5C RCC2 YWHAG PDHB NECAP2 RFC3
SMARCD1 DLD SKP1 ZMYND8 NR0B2 PELO RPL14
KDM4A POLD1 TAF6L ESCO2 REPIN1 HSPG2 ACTA1
TRAP1 HNRNPA2B1 PSME4 DCT NFE4 ANXA2 ATP1A1
TBL1XR1 GNL3 RNGTT PTMA NDUFS3 MORF4L2 ILF3
PPP2R1B CSNK2A1 SKI SMAP2 SOX5 TUBB YWHAB
PRDM1 B2M NUP153 PWWP2A MDN1 NMI IGHE
NDUFA2 EIF3B PSMC2 STON2 ACTN4 SND1 RALA
PRPS2 SLC3A2 AIRE ACTBL2 VASP ESYT1 SMAD4
COPE TLE4 TSHZ3 CACYBP IGF2R NUP205 HNRNPR
ZNF148 ZNFX1 ZBTB17 ATP6V1B2 CSE1L NUP133 MRPL13
RAC1 PEX14 PPP2R5E PPT1 ZBTB2 SAMSN1 HESX1
VWA9 IDH3A H1FX XPO1 RAP1A HP1BP3 MRPS28
QKI G6PD C8orf33 RPL19 HSPH1 NHP2 NKX2-2
TRIM27 RCOR2 TSC22D3 PSMD11 VPS35 PAICS NR2E3
ARID5B RPS16 EEF1G RAP1B NKX3-2 EXOC6 PSMC1
ARL1 CSNK2B PGK1 RPL28 TRIM28 MCM7 GATA2
CAPZA1 MCM6 HIST1H2AG TOP2A COMT EMG1 MACF1
AARS FOXH1 VPRBP STX4 CBFA2T3 RXRG HSPD1
IPO7 NR2C2 UBE2N HNRNPH2 KRT18 ASUN GANAB
GPS2 CUX2 NAT10 RBM39 SSBP2 FANCD2 HIST1H2BD
FUS SAP30L PTK2 TLE6 NF1 PA2G4 MSN
XPO5 MYL12B PAFAH1B2 SPEN UHRF2 YWHAQ HNRNPD
KPNB1 WDR36 STAG2 PSMA2 DHX9 PAX3 BHLHE40
TUBA1C SF3B1 NONO ZNF521 APPL1 SOX6 HEY2
XRN1 CCT6A KCTD11 CCT3 HIGD1A ARHGEF2 SRSF1
GRIP1 DDX52 SNRNP70 SYNCRIP HNRNPA0 BAZ1A TOP2B
BRCA2 TFDP1 PUF60 UBE3A ILK SSBP3 ATP5A1
NEK9 FAU TRMT1L PFDN2 IKZF2 KPNA2 C3orf33
POLD3 BCL6B MSH3 GTF3C4 ZBTB7A RPL29 NUP155
PHB2 LONP1 CLIC2 YTHDF2 ACOT13 TP73 BMX
ANXA1 C11orf30 TBL3 LMNB1 YWHAZ RPL22 RPL36
TFPI FBXW7 GTF3C1 RPL23A KDM5B RPLP2 FKBP3
BBX HSD11B2 RPS7 RPL8 APBB1 HADHB
Data information
Please see the Gene Interactions Track Manual.