The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
ModBase Predicted Comparative 3D Structure on Q8N8V8
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Gene Ontology (GO) Annotations with Structured Vocabulary
Cellular Component: GO:0016020 membrane GO:0016021 integral component of membrane
Descriptions from all associated GenBank mRNAs
AK096111 - Homo sapiens cDNA FLJ38792 fis, clone LIVER2003511. JD253053 - Sequence 234077 from Patent EP1572962. JD463404 - Sequence 444428 from Patent EP1572962. JD383604 - Sequence 364628 from Patent EP1572962. JD104452 - Sequence 85476 from Patent EP1572962. JD135414 - Sequence 116438 from Patent EP1572962. JD445713 - Sequence 426737 from Patent EP1572962. JD373109 - Sequence 354133 from Patent EP1572962. JD413186 - Sequence 394210 from Patent EP1572962. JD460459 - Sequence 441483 from Patent EP1572962. JD493889 - Sequence 474913 from Patent EP1572962. JD161955 - Sequence 142979 from Patent EP1572962. JD342522 - Sequence 323546 from Patent EP1572962. JD312295 - Sequence 293319 from Patent EP1572962. JD401136 - Sequence 382160 from Patent EP1572962. JD056320 - Sequence 37344 from Patent EP1572962. JD440173 - Sequence 421197 from Patent EP1572962. JD045343 - Sequence 26367 from Patent EP1572962. JD162177 - Sequence 143201 from Patent EP1572962. JD365788 - Sequence 346812 from Patent EP1572962. JD271760 - Sequence 252784 from Patent EP1572962. JD272619 - Sequence 253643 from Patent EP1572962. JD075142 - Sequence 56166 from Patent EP1572962. JD098515 - Sequence 79539 from Patent EP1572962. JD076821 - Sequence 57845 from Patent EP1572962. JD408848 - Sequence 389872 from Patent EP1572962. JD566611 - Sequence 547635 from Patent EP1572962. JD140731 - Sequence 121755 from Patent EP1572962. JD169845 - Sequence 150869 from Patent EP1572962. JD097541 - Sequence 78565 from Patent EP1572962. JD114752 - Sequence 95776 from Patent EP1572962. JD550593 - Sequence 531617 from Patent EP1572962. JD362747 - Sequence 343771 from Patent EP1572962. JD477103 - Sequence 458127 from Patent EP1572962. JD256650 - Sequence 237674 from Patent EP1572962. JD102844 - Sequence 83868 from Patent EP1572962. JD071909 - Sequence 52933 from Patent EP1572962. JD326560 - Sequence 307584 from Patent EP1572962. JD467768 - Sequence 448792 from Patent EP1572962. JD480905 - Sequence 461929 from Patent EP1572962. JD543980 - Sequence 525004 from Patent EP1572962. JD561119 - Sequence 542143 from Patent EP1572962. JD262192 - Sequence 243216 from Patent EP1572962. JD087172 - Sequence 68196 from Patent EP1572962. JD293533 - Sequence 274557 from Patent EP1572962. JD200086 - Sequence 181110 from Patent EP1572962. JD164814 - Sequence 145838 from Patent EP1572962. JD479352 - Sequence 460376 from Patent EP1572962. JD261296 - Sequence 242320 from Patent EP1572962. JD454910 - Sequence 435934 from Patent EP1572962. JD163985 - Sequence 145009 from Patent EP1572962. JD425013 - Sequence 406037 from Patent EP1572962. JD365557 - Sequence 346581 from Patent EP1572962. JD239872 - Sequence 220896 from Patent EP1572962. JD224476 - Sequence 205500 from Patent EP1572962. JD140926 - Sequence 121950 from Patent EP1572962. JD272815 - Sequence 253839 from Patent EP1572962. JD543479 - Sequence 524503 from Patent EP1572962. JD162211 - Sequence 143235 from Patent EP1572962. JD162210 - Sequence 143234 from Patent EP1572962.