Human Gene MAP3K5 (uc003qhc.3)
  Description: Homo sapiens mitogen-activated protein kinase kinase kinase 5 (MAP3K5), mRNA.
RefSeq Summary (NM_005923): Mitogen-activated protein kinase (MAPK) signaling cascades include MAPK or extracellular signal-regulated kinase (ERK), MAPK kinase (MKK or MEK), and MAPK kinase kinase (MAPKKK or MEKK). MAPKK kinase/MEKK phosphorylates and activates its downstream protein kinase, MAPK kinase/MEK, which in turn activates MAPK. The kinases of these signaling cascades are highly conserved, and homologs exist in yeast, Drosophila, and mammalian cells. MAPKKK5 contains 1,374 amino acids with all 11 kinase subdomains. Northern blot analysis shows that MAPKKK5 transcript is abundantly expressed in human heart and pancreas. The MAPKKK5 protein phosphorylates and activates MKK4 (aliases SERK1, MAPKK4) in vitro, and activates c-Jun N-terminal kinase (JNK)/stress-activated protein kinase (SAPK) during transient expression in COS and 293 cells; MAPKKK5 does not activate MAPK/ERK. [provided by RefSeq, Jul 2008].
Transcript (Including UTRs)
   Position: hg19 chr6:136,878,187-137,113,656 Size: 235,470 Total Exon Count: 30 Strand: -
Coding Region
   Position: hg19 chr6:136,878,896-137,113,295 Size: 234,400 Coding Exon Count: 30 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsMalaCards
CTDGene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesModel Information
Methods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr6:136,878,187-137,113,656)mRNA (may differ from genome)Protein (1374 aa)
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-  Comments and Description Text from UniProtKB
  ID: M3K5_HUMAN
DESCRIPTION: RecName: Full=Mitogen-activated protein kinase kinase kinase 5; EC=2.7.11.25; AltName: Full=Apoptosis signal-regulating kinase 1; Short=ASK-1; AltName: Full=MAPK/ERK kinase kinase 5; Short=MEK kinase 5; Short=MEKK 5;
FUNCTION: Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signaling for determination of cell fate such as differentiation and survival. Plays a crucial role in the apoptosis signal transduction pathway through mitochondria-dependent caspase activation. MAP3K5/ASK1 is required for the innate immune response, which is essential for host defense against a wide range of pathogens. Mediates signal transduction of various stressors like oxidative stress as well as by receptor-mediated inflammatory signals, such as the tumor necrosis factor (TNF) or lipopolysaccharide (LPS). Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K4/SEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs and c-jun N-terminal kinases (JNKs). Both p38 MAPK and JNKs control the transcription factors activator protein-1 (AP-1).
CATALYTIC ACTIVITY: ATP + a protein = ADP + a phosphoprotein.
COFACTOR: Magnesium.
ENZYME REGULATION: Activated by various stressors, including oxidative stress, endoplasmic reticulum stress, and calcium overload, as well as by receptor-mediated inflammatory signals, such as the tumor necrosis factor (TNF) and lipopolysaccharide (LPS). Homophilic association of MAP3K5/ASK1 through the C- terminal coiled-coil domains and the heteromeric complex formation of MAP3K5/ASK1 with the reduced form of thioredoxin (TXN), constitutes an inactive form of the kinase. Upon ROS-induced dissociation of TXN from MAP3K5/ASK1, TRAF2 and TRAF6 are reciprocally recruited to MAP3K5/ASK1 and form the active MAP3K5/ASK1 signalosome, in which TRAF2 and TRAF6 appear to facilitate the active configuration of MAP3K5/ASK1. MAP3K5/ASK1 activity is also regulated through several phosphorylation and dephosphorylation events. Thr-838 is an activating phosphorylation site that is autophosphorylated and phosphorylated by MAP3K6/ASK2 and dephosphorylated by PPP5C. Ser-83 and Ser-1033 are inactivating phosphorylation sites, the former of which is phosphorylated by AKT1 and AKT2. Phosphorylation of Ser-966 induces association of MAP3K5/ASK1 with the 14-3-3 family proteins, which suppresses MAP3K5/ASK1 activity. Calcium/calmodulin-activated protein phosphatase calcineurin (PPP3CA) has been shown to directly dephosphorylate this site. SOCS1 binds to ASK1 by recognizing phosphorylation of Tyr-718 and induces MAP3K5/ASK1 degradation in endothelial cells. Also dephosphorylated and activated by PGAM5. Contains an N-terminal autoinhibitory domain.
SUBUNIT: Homodimer when inactive. Binds both upstream activators and downstream substrates in multimolecular complexes. Associates with and inhibited by HIV-1 Nef. Part of a cytoplasmic complex made of HIPK1, DAB2IP and MAP3K5 in response to TNF. This complex formation promotes MAP3K5-JNK activation and subsequent apoptosis. Interacts with SOCS1 which recognizes phosphorylation of Tyr-718 and induces MAP3K5/ASK1 degradation in endothelial cells. Interacts with the 14-3-3 family proteins such as YWHAB, YWHAE, YWHAQ, YWHAH, YWHAZ and SFN. Interacts with ARRB2, BIRC2, DAB2IP, IGF1R, MAP3K6/ASK2, PGAM5, PIM1, PPP5C, SOCS1, STUB1, TRAF2, TRAF6 and TXN. Interacts with ERN1 in a TRAF2-dependent manner. Interacts with calcineurin subunit PPP3R1 and with PPM1L (By similarity). Interacts (via N-terminus) with RAF1 and this interaction inhibits the proapoptotic function of MAP3K5.
INTERACTION: P31749:AKT1; NbExp=2; IntAct=EBI-476263, EBI-296087; Q9UER7:DAXX; NbExp=6; IntAct=EBI-476263, EBI-77321; P46734:MAP2K3; NbExp=2; IntAct=EBI-476263, EBI-602462; Q9WTR2:Map3k6 (xeno); NbExp=3; IntAct=EBI-476263, EBI-1254790; P10599:TXN; NbExp=2; IntAct=EBI-476263, EBI-594644; P31946:YWHAB; NbExp=3; IntAct=EBI-476263, EBI-359815; P63104:YWHAZ; NbExp=2; IntAct=EBI-476263, EBI-347088; Q969S3:ZNF622; NbExp=14; IntAct=EBI-476263, EBI-2687480;
SUBCELLULAR LOCATION: Cytoplasm. Endoplasmic reticulum. Note=Interaction with 14-3-3 proteins alters the distribution of MAP3K5/ASK1 and restricts it to the perinuclear endoplasmic reticulum region.
TISSUE SPECIFICITY: Abundantly expressed in heart and pancreas.
INDUCTION: By TNF. Inhibited by HIV-1 Nef.
PTM: Phosphorylated at Thr-838 through autophosphorylation and by MAP3K6/ASK2 which leads to activation. Thr-838 is dephosphorylated by PPP5C. Ser-83 and Ser-1033 are inactivating phosphorylation sites, the former of which is phosphorylated by AKT1 and AKT2. Phosphorylated at Ser-966 which induces association of MAP3K5/ASK1 with the 14-3-3 family proteins and suppresses MAP3K5/ASK1 activity. Calcineurin (CN) dephosphorylates this site. Also dephosphorylated and activated by PGAM5.
PTM: Ubiquitinated. Tumor necrosis factor (TNF) induces TNFR2- dependent ubiquitination leading to proteasomal degradation.
SIMILARITY: Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
SIMILARITY: Contains 1 protein kinase domain.

-  Primer design for this transcript
 

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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): MAP3K5
CDC HuGE Published Literature: MAP3K5
Positive Disease Associations: Attention Deficit Disorder with Hyperactivity , Diabetic Nephropathies , Heart Rate
Related Studies:
  1. Attention Deficit Disorder with Hyperactivity
    , , . [PubMed 0]
  2. Attention Deficit Disorder with Hyperactivity
    , , . [PubMed 0]
  3. Diabetic Nephropathies
    , , . [PubMed 0]
           more ... click here to view the complete list

-  MalaCards Disease Associations
  MalaCards Gene Search: MAP3K5
Diseases sorted by gene-association score: ischemia (5), hiv-1 (5), fatty liver disease (4), amphetamine abuse (1)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 78.43 RPKM in Adrenal Gland
Total median expression: 582.03 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -198.90361-0.551 Picture PostScript Text
3' UTR -159.00709-0.224 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR025136 - DUF4071
IPR011009 - Kinase-like_dom
IPR000719 - Prot_kinase_cat_dom
IPR017441 - Protein_kinase_ATP_BS
IPR013761 - SAM/pointed
IPR002290 - Ser/Thr_dual-sp_kinase_dom
IPR008271 - Ser/Thr_kinase_AS

Pfam Domains:
PF00069 - Protein kinase domain
PF07714 - Protein tyrosine kinase
PF13281 - Domain of unknown function (DUF4071)

SCOP Domains:
47769 - SAM/Pointed domain
56112 - Protein kinase-like (PK-like)

Protein Data Bank (PDB) 3-D Structure
MuPIT help
2CLQ - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on Q99683
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologGenome BrowserNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
  Ensembl   
  Protein Sequence   
  Alignment   

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0004709 MAP kinase kinase kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016740 transferase activity
GO:0019901 protein kinase binding
GO:0019903 protein phosphatase binding
GO:0019904 protein domain specific binding
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding

Biological Process:
GO:0000165 MAPK cascade
GO:0000186 activation of MAPKK activity
GO:0000187 activation of MAPK activity
GO:0001934 positive regulation of protein phosphorylation
GO:0002376 immune system process
GO:0002931 response to ischemia
GO:0006468 protein phosphorylation
GO:0006915 apoptotic process
GO:0007254 JNK cascade
GO:0007257 activation of JUN kinase activity
GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0010666 positive regulation of cardiac muscle cell apoptotic process
GO:0010941 regulation of cell death
GO:0016032 viral process
GO:0016310 phosphorylation
GO:0034198 cellular response to amino acid starvation
GO:0034976 response to endoplasmic reticulum stress
GO:0038066 p38MAPK cascade
GO:0042060 wound healing
GO:0043065 positive regulation of apoptotic process
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043507 positive regulation of JUN kinase activity
GO:0045087 innate immune response
GO:0045663 positive regulation of myoblast differentiation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0046330 positive regulation of JNK cascade
GO:0051403 stress-activated MAPK cascade
GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070301 cellular response to hydrogen peroxide
GO:0071356 cellular response to tumor necrosis factor
GO:0072577 endothelial cell apoptotic process
GO:0097190 apoptotic signaling pathway
GO:0097300 programmed necrotic cell death
GO:1900745 positive regulation of p38MAPK cascade
GO:1901216 positive regulation of neuron death
GO:1902170 cellular response to reactive nitrogen species
GO:1904707 positive regulation of vascular smooth muscle cell proliferation

Cellular Component:
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0009897 external side of plasma membrane
GO:0032991 macromolecular complex
GO:1902911 protein kinase complex
GO:1990604 IRE1-TRAF2-ASK1 complex


-  Descriptions from all associated GenBank mRNAs
  HH933925 - Sequence 119 from Patent WO2010111464.
HV964429 - JP 2012521760-A/119: RNA Interference Mediated Inhibition of Apoptosis Signal-Regulating Kinase 1 (ASK1) Gene Expression Using Short Interfering Nucleic Acid (siNA).
U67156 - Human mitogen-activated kinase kinase kinase 5 (MAPKKK5) mRNA, complete cds.
AK294507 - Homo sapiens cDNA FLJ50139 complete cds, highly similar to Mitogen-activated protein kinase kinase kinase 5(EC 2.7.11.25).
BC054503 - Homo sapiens mitogen-activated protein kinase kinase kinase 5, mRNA (cDNA clone MGC:60047 IMAGE:6143181), complete cds.
BC088829 - Homo sapiens mitogen-activated protein kinase kinase kinase 5, mRNA (cDNA clone MGC:87795 IMAGE:6007002), complete cds.
D84476 - Homo sapiens ASK1 mRNA for apoptosis signal-regulating kinase 1, complete cds.
AB209093 - Homo sapiens mRNA for mitogen-activated protein kinase kinase kinase 5 variant protein.
AB384845 - Synthetic construct DNA, clone: pF1KB3725, Homo sapiens MAP3K5 gene for mitogen-activated protein kinase kinase kinase 5, complete cds, without stop codon, in Flexi system.
AK293953 - Homo sapiens cDNA FLJ51736 partial cds, highly similar to Mitogen-activated protein kinase kinase kinase 5 (EC 2.7.11.25).
AK310942 - Homo sapiens cDNA, FLJ17984.
JD548909 - Sequence 529933 from Patent EP1572962.
JD371182 - Sequence 352206 from Patent EP1572962.
JD485859 - Sequence 466883 from Patent EP1572962.
JD512209 - Sequence 493233 from Patent EP1572962.
JD203566 - Sequence 184590 from Patent EP1572962.
JD104533 - Sequence 85557 from Patent EP1572962.
JD424390 - Sequence 405414 from Patent EP1572962.
JD257219 - Sequence 238243 from Patent EP1572962.
JD071604 - Sequence 52628 from Patent EP1572962.
JD095860 - Sequence 76884 from Patent EP1572962.
JD513837 - Sequence 494861 from Patent EP1572962.
JD394184 - Sequence 375208 from Patent EP1572962.
MP015053 - Sequence 256 from Patent WO2019016252.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa04010 - MAPK signaling pathway
hsa04722 - Neurotrophin signaling pathway
hsa05014 - Amyotrophic lateral sclerosis (ALS)

BioCarta from NCI Cancer Genome Anatomy Project
h_keratinocytePathway - Keratinocyte Differentiation
h_41bbPathway - The 4-1BB-dependent immune response
h_HivnefPathway - HIV-I Nef: negative effector of Fas and TNF
h_mapkPathway - MAPKinase Signaling Pathway
h_p38mapkPathway - p38 MAPK Signaling Pathway

Reactome (by CSHL, EBI, and GO)

Protein Q99683 (Reactome details) participates in the following event(s):

R-HSA-3225851 ROS oxidize thioredoxin and activate MAP3K5
R-HSA-3228469 MAP3K5 phosphorylates MKK3 and MKK6
R-HSA-3229152 MAP3K5 (ASK1) phosphorylates MAP2K4 (SEK1)
R-NUL-3299417 MAP3K5 (ASK1) phosphorylates Map2k4(Sek1)
R-HSA-2559580 Oxidative Stress Induced Senescence
R-HSA-2559583 Cellular Senescence
R-HSA-2262752 Cellular responses to stress
R-HSA-8953897 Cellular responses to external stimuli

-  Other Names for This Gene
  Alternate Gene Symbols: ASK1, M3K5_HUMAN, MAPKKK5, MEKK5, NM_005923, NP_005914, Q5THN3, Q99461, Q99683
UCSC ID: uc003qhc.3
RefSeq Accession: NM_005923
Protein: Q99683 (aka M3K5_HUMAN)
CCDS: CCDS5179.1

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NM_005923.3
exon count: 30CDS single in 3' UTR: no RNA size: 5215
ORF size: 4125CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 8288.00frame shift in genome: no % Coverage: 99.62
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.