Human Gene IRS4 (uc004eoc.2)
  Description: Homo sapiens insulin receptor substrate 4 (IRS4), mRNA.
RefSeq Summary (NM_003604): IRS4 encodes the insulin receptor substrate 4, a cytoplasmic protein that contains many potential tyrosine and serine/threonine phosphorylation sites. Tyrosine-phosphorylated IRS4 protein has been shown to associate with cytoplasmic signalling molecules that contain SH2 domains. The IRS4 protein is phosphorylated by the insulin receptor tyrosine kinase upon receptor stimulation.. [provided by RefSeq, Jul 2008].
Transcript (Including UTRs)
   Position: hg19 chrX:107,975,727-107,979,607 Size: 3,881 Total Exon Count: 1 Strand: -
Coding Region
   Position: hg19 chrX:107,975,801-107,979,574 Size: 3,774 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsMalaCards
CTDGene AllelesRNA StructureProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chrX:107,975,727-107,979,607)mRNA (may differ from genome)Protein (1257 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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neXtProtOMIMPubMedReactomeTreefamUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: IRS4_HUMAN
DESCRIPTION: RecName: Full=Insulin receptor substrate 4; Short=IRS-4; AltName: Full=160 kDa phosphotyrosine protein; Short=py160; AltName: Full=Phosphoprotein of 160 kDa; Short=pp160;
FUNCTION: Acts as an interface between multiple growth factor receptors possessing tyrosine kinase activity, such as insulin receptor, IGF1R and FGFR1, and a complex network of intracellular signaling molecules containing SH2 domains. Involved in the IGF1R mitogenic signaling pathway. Promotes the AKT1 signaling pathway and BAD phosphorylation during insulin stimulation without activation of RPS6KB1 or the inhibition of apoptosis. Interaction with GRB2 enhances insulin-stimulated mitogen-activated protein kinase activity. May be involved in nonreceptor tyrosine kinase signaling in myoblasts. Plays a pivotal role in the proliferation/differentiation of hepatoblastoma cell through EPHB2 activation upon IGF1 stimulation. May play a role in the signal transduction in response to insulin and to a lesser extent in response to IL4 and GH on mitogenesis. Plays a role in growth, reproduction and glucose homeostasis. May act as negative regulators of the IGFI signaling pathway by suppressing the function of IRS1 and IRS2.
SUBUNIT: Interacts with SOCS6 in response to stimulatiom with either insulin or IGF1 (By similarity). Interacts with CRK and CRKL. Interaction with CRK is stronger than with CRKL. Interacts with CRK via the phosphorylated YXXM motifs. Interacts with GRB2 and PIK3R1. Interacts with PLC-gamma, SHC1, PTK6, PPP4C and NISCH.
SUBCELLULAR LOCATION: Cell membrane; Peripheral membrane protein; Cytoplasmic side.
TISSUE SPECIFICITY: Expressed in myoblasts. Expressed in liver and hepatocellular carcinoma.
INDUCTION: Down-regulated by PPP4C in a phosphatase activity- dependent manner.
PTM: Phosphorylated on tyrosine residues in response to both insulin and IGF1 signaling. Phosphorylated on Tyr-921 in response to FGF2 signaling. Phosphorylation of Tyr-921 is required for GRB2, phospholipase C-gamma and phosphatidylinositol 3-kinase interaction.
SIMILARITY: Contains 1 IRS-type PTB domain.
SIMILARITY: Contains 1 PH domain.

-  Primer design for this transcript
 

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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): IRS4
CDC HuGE Published Literature: IRS4

-  MalaCards Disease Associations
  MalaCards Gene Search: IRS4
Diseases sorted by gene-association score: exostosis (9), lipodystrophy, familial partial, type 2 (8), cribriform carcinoma (7), boutonneuse fever (6)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -0.3433-0.010 Picture PostScript Text
3' UTR -12.7074-0.172 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR002404 - Insln_rcpt_S1
IPR011993 - PH_like_dom
IPR001849 - Pleckstrin_homology

Pfam Domains:
PF02174 - PTB domain (IRS-1 type)

SCOP Domains:
50729 - PH domain-like

ModBase Predicted Comparative 3D Structure on O14654
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
      
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004871 signal transducer activity
GO:0005070 SH3/SH2 adaptor activity
GO:0005158 insulin receptor binding
GO:0005515 protein binding
GO:0043548 phosphatidylinositol 3-kinase binding

Biological Process:
GO:0007165 signal transduction
GO:0008286 insulin receptor signaling pathway
GO:0009967 positive regulation of signal transduction
GO:0019216 regulation of lipid metabolic process

Cellular Component:
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  AF007567 - Homo sapiens insulin receptor substrate 4 mRNA, complete cds.
JD522212 - Sequence 503236 from Patent EP1572962.
BC156977 - Synthetic construct Homo sapiens clone IMAGE:100062785, MGC:190614 insulin receptor substrate 4 (IRS4) mRNA, encodes complete protein.
BC156188 - Synthetic construct Homo sapiens clone IMAGE:100061585, MGC:190039 insulin receptor substrate 4 (IRS4) mRNA, encodes complete protein.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa04722 - Neurotrophin signaling pathway
hsa04910 - Insulin signaling pathway
hsa04920 - Adipocytokine signaling pathway
hsa04930 - Type II diabetes mellitus
hsa04960 - Aldosterone-regulated sodium reabsorption

Reactome (by CSHL, EBI, and GO)

Protein O14654 (Reactome details) participates in the following event(s):

R-HSA-2428930 IGF1,2:p-Y1161,1165,1166-IGF1R binds IRS1,4
R-HSA-2428926 IGF1,2:p-Y1161,1165,1166-IGF1R phosphorylates IRS1,2,4
R-HSA-2428928 IRS-related events triggered by IGF1R
R-HSA-2428924 IGF1R signaling cascade
R-HSA-2404192 Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
R-HSA-9006934 Signaling by Receptor Tyrosine Kinases
R-HSA-162582 Signal Transduction

-  Other Names for This Gene
  Alternate Gene Symbols: IRS4_HUMAN, NM_003604, NP_003595, O14654
UCSC ID: uc004eoc.2
RefSeq Accession: NM_003604
Protein: O14654 (aka IRS4_HUMAN)
CCDS: CCDS14544.1

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NM_003604.2
exon count: 1CDS single in 3' UTR: no RNA size: 3881
ORF size: 3774CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 7324.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.